RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 NEBP20929 6669 aa2.82□□□□□ -1.96
SPEN-204ENST00000471538 SPRR2GQ9BYE4 73 aa2.81□□□□□ -1.96
SPEN-204ENST00000471538 MT2AP02795 61 aa2.78□□□□□ -1.96
SPEN-204ENST00000471538 MT1FP04733 61 aa2.77□□□□□ -1.97
SPEN-204ENST00000471538 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
SPEN-204ENST00000471538 CAMK2N1Q7Z7J9 78 aa2.76□□□□□ -1.97
SPEN-204ENST00000471538 KRTAP19-8Q3LI54 63 aa2.72□□□□□ -1.97
SPEN-204ENST00000471538 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
SPEN-204ENST00000471538 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
SPEN-204ENST00000471538 TNP1P09430 55 aa2.68□□□□□ -1.98
SPEN-204ENST00000471538 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
SPEN-204ENST00000471538 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
SPEN-204ENST00000471538 MT1BP07438 61 aa2.68□□□□□ -1.98
SPEN-204ENST00000471538 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
SPEN-204ENST00000471538 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
SPEN-204ENST00000471538 KRTAP10-5P60370 271 aa2.65□□□□□ -1.99
SPEN-204ENST00000471538 KRTAP19-6Q3LI70 58 aa2.65□□□□□ -1.99
SPEN-204ENST00000471538 MT1XP80297 61 aa2.62□□□□□ -1.99
SPEN-204ENST00000471538 KMT2DO14686 5537 aa2.6□□□□□ -1.99
SPEN-204ENST00000471538 MT3P25713 68 aa2.6□□□□□ -1.99
SPEN-204ENST00000471538 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
SPEN-204ENST00000471538 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
SPEN-204ENST00000471538 LCE3AQ5TA76 89 aa2.58□□□□□ -2
SPEN-204ENST00000471538 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
SPEN-204ENST00000471538 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
SPEN-204ENST00000471538 NDUFAF8A1L188 74 aa2.54□□□□□ -2
SPEN-204ENST00000471538 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
SPEN-204ENST00000471538 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
SPEN-204ENST00000471538 KRTAP10-12P60413 245 aa2.51□□□□□ -2.01
SPEN-204ENST00000471538 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
SPEN-204ENST00000471538 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
SPEN-204ENST00000471538 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.02
SPEN-204ENST00000471538 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.02
SPEN-204ENST00000471538 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
SPEN-204ENST00000471538 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
SPEN-204ENST00000471538 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
SPEN-204ENST00000471538 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
SPEN-204ENST00000471538 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
SPEN-204ENST00000471538 KRTAP19-7Q3SYF9 63 aa2.34□□□□□ -2.03
SPEN-204ENST00000471538 SPRR2EP22531 72 aa2.34□□□□□ -2.04
SPEN-204ENST00000471538 SPRR2BP35325 72 aa2.34□□□□□ -2.04
SPEN-204ENST00000471538 SPRR2AP35326 72 aa2.34□□□□□ -2.04
SPEN-204ENST00000471538 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
SPEN-204ENST00000471538 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
SPEN-204ENST00000471538 MT1EP04732 61 aa2.28□□□□□ -2.04
SPEN-204ENST00000471538 MT1LQ93083 61 aa2.26□□□□□ -2.05
SPEN-204ENST00000471538 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
SPEN-204ENST00000471538 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
SPEN-204ENST00000471538 SPRR2DP22532 72 aa2.25□□□□□ -2.05
SPEN-204ENST00000471538 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
SPEN-204ENST00000471538 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
SPEN-204ENST00000471538 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.07
SPEN-204ENST00000471538 MT1MQ8N339 61 aa2.14□□□□□ -2.07
SPEN-204ENST00000471538 MT1GP13640 62 aa2.13□□□□□ -2.07
SPEN-204ENST00000471538 INE1O15225 51 aa2.09□□□□□ -2.07
SPEN-204ENST00000471538 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.07
SPEN-204ENST00000471538 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
SPEN-204ENST00000471538 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
SPEN-204ENST00000471538 MT4P47944 62 aa2.01□□□□□ -2.09
SPEN-204ENST00000471538 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
SPEN-204ENST00000471538 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
SPEN-204ENST00000471538 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
SPEN-204ENST00000471538 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
SPEN-204ENST00000471538 MT1AP04731 61 aa1.91□□□□□ -2.1
SPEN-204ENST00000471538 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
SPEN-204ENST00000471538 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
SPEN-204ENST00000471538 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
SPEN-204ENST00000471538 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
SPEN-204ENST00000471538 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
SPEN-204ENST00000471538 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
SPEN-204ENST00000471538 LCE3DQ9BYE3 92 aa1.74□□□□□ -2.13
SPEN-204ENST00000471538 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
SPEN-204ENST00000471538 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
SPEN-204ENST00000471538 PRM1P04553 51 aa1.59□□□□□ -2.15
SPEN-204ENST00000471538 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
SPEN-204ENST00000471538 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
SPEN-204ENST00000471538 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
SPEN-204ENST00000471538 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms