RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 MRPL34Q9BQ48 92 aaKnown RBP1.96□□□□□ -2.1
CKS1B-204ENST00000471245 NDUFB1O75438 58 aa1.95□□□□□ -2.1
CKS1B-204ENST00000471245 GTF2H5Q6ZYL4 71 aa1.95□□□□□ -2.1
CKS1B-204ENST00000471245 DSCR8Q96T75 97 aa1.95□□□□□ -2.1
CKS1B-204ENST00000471245 KLKP1Q107X0 134 aa1.94□□□□□ -2.1
CKS1B-204ENST00000471245 PYY3Q5JQD4 70 aa1.94□□□□□ -2.1
CKS1B-204ENST00000471245 CSAG1Q6PB30 78 aa1.94□□□□□ -2.1
CKS1B-204ENST00000471245 K7EQZ3 153 aa1.93□□□□□ -2.1
CKS1B-204ENST00000471245 MT1XP80297 61 aa1.93□□□□□ -2.1
CKS1B-204ENST00000471245 VAMP8Q9BV40 100 aa1.92□□□□□ -2.1
CKS1B-204ENST00000471245 S4R3F8 94 aa1.92□□□□□ -2.1
CKS1B-204ENST00000471245 A0A087WVE0 104 aa1.91□□□□□ -2.1
CKS1B-204ENST00000471245 COX6CP09669 75 aa1.91□□□□□ -2.1
CKS1B-204ENST00000471245 DMAC1Q96GE9 116 aa1.9□□□□□ -2.11
CKS1B-204ENST00000471245 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
CKS1B-204ENST00000471245 HCG22E2RYF7 251 aa1.89□□□□□ -2.11
CKS1B-204ENST00000471245 NREPQ16612 68 aa1.89□□□□□ -2.11
CKS1B-204ENST00000471245 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
CKS1B-204ENST00000471245 SERP1Q9Y6X1 66 aa1.88□□□□□ -2.11
CKS1B-204ENST00000471245 CRIPTQ9P021 101 aa1.87□□□□□ -2.11
CKS1B-204ENST00000471245 MT-ATP8P03928 68 aa1.86□□□□□ -2.11
CKS1B-204ENST00000471245 ATXN8Q156A1 80 aa1.85□□□□□ -2.11
CKS1B-204ENST00000471245 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
CKS1B-204ENST00000471245 UQCR10Q9UDW1 63 aa1.84□□□□□ -2.11
CKS1B-204ENST00000471245 MT4P47944 62 aa1.83□□□□□ -2.12
CKS1B-204ENST00000471245 H0YAA0 97 aa1.81□□□□□ -2.12
CKS1B-204ENST00000471245 PLAC4Q8WY50 150 aa1.81□□□□□ -2.12
CKS1B-204ENST00000471245 K7EP34 96 aa1.8□□□□□ -2.12
CKS1B-204ENST00000471245 CYP4F30PQ9H0H9 118 aa1.8□□□□□ -2.12
CKS1B-204ENST00000471245 LOC101927531A0A1B0GV80 90 aa1.76□□□□□ -2.13
CKS1B-204ENST00000471245 ATP5EP56381 51 aaPredicted RBP1.76□□□□□ -2.13
CKS1B-204ENST00000471245 NDUFC1O43677 76 aa1.75□□□□□ -2.13
CKS1B-204ENST00000471245 KRTAP19-3Q7Z4W3 81 aa1.75□□□□□ -2.13
CKS1B-204ENST00000471245 TP53AIP1Q9HCN2 124 aa1.75□□□□□ -2.13
CKS1B-204ENST00000471245 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
CKS1B-204ENST00000471245 A0A1W2PPM0 123 aa1.73□□□□□ -2.13
CKS1B-204ENST00000471245 M0QZ58 72 aa1.73□□□□□ -2.13
CKS1B-204ENST00000471245 ATOX1O00244 68 aa1.72□□□□□ -2.13
CKS1B-204ENST00000471245 LINC00208Q96KT6 92 aa1.72□□□□□ -2.13
CKS1B-204ENST00000471245 UBL5Q9BZL1 73 aa1.72□□□□□ -2.13
CKS1B-204ENST00000471245 TRAV22A0A0B4J277 110 aa1.71□□□□□ -2.14
CKS1B-204ENST00000471245 MT1EP04732 61 aa1.71□□□□□ -2.14
CKS1B-204ENST00000471245 SPCS1Q9Y6A9 102 aa1.71□□□□□ -2.14
CKS1B-204ENST00000471245 ACYP1P07311 99 aa1.69□□□□□ -2.14
CKS1B-204ENST00000471245 ETDBQ3ZM63 59 aa1.69□□□□□ -2.14
CKS1B-204ENST00000471245 SERP2Q8N6R1 65 aa1.69□□□□□ -2.14
CKS1B-204ENST00000471245 H0Y9P7 68 aa1.68□□□□□ -2.14
CKS1B-204ENST00000471245 MT1GP13640 62 aa1.68□□□□□ -2.14
CKS1B-204ENST00000471245 SPTSSBQ8NFR3 76 aa1.68□□□□□ -2.14
CKS1B-204ENST00000471245 H7BZZ5 65 aa1.66□□□□□ -2.14
CKS1B-204ENST00000471245 MT1MQ8N339 61 aa1.66□□□□□ -2.14
CKS1B-204ENST00000471245 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.15
CKS1B-204ENST00000471245 C20orf197Q8N268 126 aa1.65□□□□□ -2.15
CKS1B-204ENST00000471245 KRTAP19-5Q3LI72 72 aa1.63□□□□□ -2.15
CKS1B-204ENST00000471245 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
CKS1B-204ENST00000471245 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
CKS1B-204ENST00000471245 MT1LQ93083 61 aa1.6□□□□□ -2.15
CKS1B-204ENST00000471245 CHKB-CPT1BH3BT56 60 aa1.58□□□□□ -2.16
CKS1B-204ENST00000471245 LINC00643Q86TS7 51 aa1.58□□□□□ -2.16
CKS1B-204ENST00000471245 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
CKS1B-204ENST00000471245 A0A0D9SG42 100 aa1.57□□□□□ -2.16
CKS1B-204ENST00000471245 ATP5EP2Q5VTU8 51 aa1.56□□□□□ -2.16
CKS1B-204ENST00000471245 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
CKS1B-204ENST00000471245 ACYP2P14621 99 aa1.51□□□□□ -2.17
CKS1B-204ENST00000471245 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
CKS1B-204ENST00000471245 PRR15LQ9BU68 103 aa1.49□□□□□ -2.17
CKS1B-204ENST00000471245 LINC01558Q9Y6Z2 57 aa1.48□□□□□ -2.17
CKS1B-204ENST00000471245 SPATA8Q6RVD6 105 aa1.47□□□□□ -2.17
CKS1B-204ENST00000471245 UQCR11O14957 56 aa1.43□□□□□ -2.18
CKS1B-204ENST00000471245 TNP1P09430 55 aa1.39□□□□□ -2.19
CKS1B-204ENST00000471245 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
CKS1B-204ENST00000471245 MT1AP04731 61 aa1.35□□□□□ -2.19
CKS1B-204ENST00000471245 KRTAP6-2Q3LI66 62 aa1.35□□□□□ -2.19
CKS1B-204ENST00000471245 A0A1B0GU69 56 aa1.29□□□□□ -2.2
CKS1B-204ENST00000471245 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
CKS1B-204ENST00000471245 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
CKS1B-204ENST00000471245 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
CKS1B-204ENST00000471245 PRM1P04553 51 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 80.7 ms