RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 LCE3BQ5TA77 95 aa9.14□□□□□ -0.95
KPNA4-202ENST00000469804 CDC42SE1Q9NRR8 79 aa9.11□□□□□ -0.95
KPNA4-202ENST00000469804 KRTAP2-2Q9BYT5 123 aa9.1□□□□□ -0.95
KPNA4-202ENST00000469804 KRTAP2-1Q9BYU5 128 aa9.1□□□□□ -0.95
KPNA4-202ENST00000469804 MT1LQ93083 61 aa9.08□□□□□ -0.96
KPNA4-202ENST00000469804 MT1GP13640 62 aa9.04□□□□□ -0.96
KPNA4-202ENST00000469804 KRTAP12-3P60328 96 aa9.01□□□□□ -0.97
KPNA4-202ENST00000469804 MT1MQ8N339 61 aa8.95□□□□□ -0.98
KPNA4-202ENST00000469804 PP632Q6XCG6 107 aa8.94□□□□□ -0.98
KPNA4-202ENST00000469804 ROMO1P60602 79 aa8.9□□□□□ -0.98
KPNA4-202ENST00000469804 DSTQ03001 7570 aaKnown RBP8.83□□□□□ -1
KPNA4-202ENST00000469804 KRTAP4-3Q9BYR4 195 aa8.8□□□□□ -1
KPNA4-202ENST00000469804 KRTAP23-1A1A580 65 aa8.79□□□□□ -1
KPNA4-202ENST00000469804 KRTAP4-7Q9BYR0 210 aa8.72□□□□□ -1.01
KPNA4-202ENST00000469804 BRK1Q8WUW1 75 aa8.59□□□□□ -1.03
KPNA4-202ENST00000469804 KRTAP15-1Q3LI76 137 aa8.54□□□□□ -1.04
KPNA4-202ENST00000469804 KRTAP4-9Q9BYQ8 210 aa8.44□□□□□ -1.06
KPNA4-202ENST00000469804 KRTAP19-4Q3LI73 84 aa8.38□□□□□ -1.07
KPNA4-202ENST00000469804 LCE3CQ5T5A8 94 aa8.33□□□□□ -1.08
KPNA4-202ENST00000469804 LCE4AQ5TA78 99 aa8.32□□□□□ -1.08
KPNA4-202ENST00000469804 LCE1DQ5T752 114 aa8.27□□□□□ -1.09
KPNA4-202ENST00000469804 KRTAP5-4Q6L8H1 288 aa8.26□□□□□ -1.09
KPNA4-202ENST00000469804 MT4P47944 62 aa8.25□□□□□ -1.09
KPNA4-202ENST00000469804 LOC100996750A0A140TA64 210 aa8.24□□□□□ -1.09
KPNA4-202ENST00000469804 KRTAP5-5Q701N2 237 aaPredicted RBP8.16□□□□□ -1.1
KPNA4-202ENST00000469804 PMAIP1Q13794 54 aa8.06□□□□□ -1.12
KPNA4-202ENST00000469804 KRTAP4-6Q9BYQ5 205 aa8.06□□□□□ -1.12
KPNA4-202ENST00000469804 HMCN1Q96RW7 5635 aa8.04□□□□□ -1.12
KPNA4-202ENST00000469804 GPR98Q8WXG9 6306 aa8.01□□□□□ -1.13
KPNA4-202ENST00000469804 KRTAP9-6A8MVA2 160 aa7.92□□□□□ -1.14
KPNA4-202ENST00000469804 SYNE1Q8NF91 8797 aaKnown RBP7.82□□□□□ -1.16
KPNA4-202ENST00000469804 KRTAP20-2Q3LI61 65 aa7.8□□□□□ -1.16
KPNA4-202ENST00000469804 KRTAP12-4P60329 112 aa7.79□□□□□ -1.16
KPNA4-202ENST00000469804 PRAC1Q96KF2 57 aa7.77□□□□□ -1.17
KPNA4-202ENST00000469804 PRO0628Q9UI54 55 aa7.76□□□□□ -1.17
KPNA4-202ENST00000469804 SPRR5A0A1B0GTR4 108 aa7.75□□□□□ -1.17
KPNA4-202ENST00000469804 MT1AP04731 61 aa7.72□□□□□ -1.17
KPNA4-202ENST00000469804 KRTAP6-1Q3LI64 71 aa7.69□□□□□ -1.18
KPNA4-202ENST00000469804 AHNAK2Q8IVF2 5795 aa7.65□□□□□ -1.19
KPNA4-202ENST00000469804 KRTAP5-3Q6L8H2 238 aa7.55□□□□□ -1.2
KPNA4-202ENST00000469804 KRTAP5-10Q6L8G5 202 aa7.45□□□□□ -1.22
KPNA4-202ENST00000469804 KRTAP9-4Q9BYQ2 154 aa7.41□□□□□ -1.22
KPNA4-202ENST00000469804 H3BS24 57 aa7.4□□□□□ -1.22
KPNA4-202ENST00000469804 KTN1-AS1Q86SY8 53 aa7.37□□□□□ -1.23
KPNA4-202ENST00000469804 KRTAP5-2Q701N4 177 aa7.32□□□□□ -1.24
KPNA4-202ENST00000469804 KRTAP6-2Q3LI66 62 aa7.25□□□□□ -1.25
KPNA4-202ENST00000469804 KRTAP4-12Q9BQ66 201 aa7.2□□□□□ -1.26
KPNA4-202ENST00000469804 KRTAP5-7Q6L8G8 165 aa7.08□□□□□ -1.28
KPNA4-202ENST00000469804 SVIPQ8NHG7 77 aa7.06□□□□□ -1.28
KPNA4-202ENST00000469804 MT3P25713 68 aa7.01□□□□□ -1.29
KPNA4-202ENST00000469804 KRTAP4-11Q9BYQ6 195 aa6.99□□□□□ -1.29
KPNA4-202ENST00000469804 KRTAP9-9Q9BYP9 154 aa6.88□□□□□ -1.31
KPNA4-202ENST00000469804 KRTAP5-8O75690 187 aa6.77□□□□□ -1.33
KPNA4-202ENST00000469804 OBSCNQ5VST9 7968 aa6.72□□□□□ -1.33
KPNA4-202ENST00000469804 KRTAP5-1Q6L8H4 278 aa6.49□□□□□ -1.37
KPNA4-202ENST00000469804 LUZP6Q538Z0 58 aa6.37□□□□□ -1.39
KPNA4-202ENST00000469804 LCE1EQ5T753 118 aa6.31□□□□□ -1.4
KPNA4-202ENST00000469804 MUC5ACP98088 5654 aa6.29□□□□□ -1.4
KPNA4-202ENST00000469804 KRTAP4-2Q9BYR5 136 aa6.2□□□□□ -1.42
KPNA4-202ENST00000469804 AHNAKQ09666 5890 aaKnown RBP6.19□□□□□ -1.42
KPNA4-202ENST00000469804 MUC5BQ9HC84 5762 aaPredicted RBP6.17□□□□□ -1.42
KPNA4-202ENST00000469804 LCE3DQ9BYE3 92 aa6.07□□□□□ -1.44
KPNA4-202ENST00000469804 LCE1BQ5T7P3 118 aa6□□□□□ -1.45
KPNA4-202ENST00000469804 LCE1CQ5T751 118 aa5.87□□□□□ -1.47
KPNA4-202ENST00000469804 LCE3EQ5T5B0 92 aa5.78□□□□□ -1.48
KPNA4-202ENST00000469804 NDUFAF8A1L188 74 aa5.54□□□□□ -1.52
KPNA4-202ENST00000469804 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.39□□□□□ -1.55
KPNA4-202ENST00000469804 KRTAP5-11Q6L8G4 156 aa5.29□□□□□ -1.56
KPNA4-202ENST00000469804 KRTAP21-2Q3LI59 83 aa5.05□□□□□ -1.6
KPNA4-202ENST00000469804 LCE1FQ5T754 118 aa5□□□□□ -1.61
KPNA4-202ENST00000469804 KRTAP4-4Q9BYR3 166 aa4.62□□□□□ -1.67
KPNA4-202ENST00000469804 PRM1P04553 51 aa4.61□□□□□ -1.67
KPNA4-202ENST00000469804 PHGR1C9JFL3 82 aa4.56□□□□□ -1.68
KPNA4-202ENST00000469804 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
KPNA4-202ENST00000469804 INE1O15225 51 aa4.43□□□□□ -1.7
KPNA4-202ENST00000469804 MUC19Q7Z5P9 8384 aa4.13□□□□□ -1.75
KPNA4-202ENST00000469804 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
KPNA4-202ENST00000469804 MUC16Q8WXI7 14507 aa2.96□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 123.4 ms