RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 MT1XP80297 61 aa3.37□□□□□ -1.87
HDAC6-216ENST00000468949 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
HDAC6-216ENST00000468949 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
HDAC6-216ENST00000468949 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
HDAC6-216ENST00000468949 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
HDAC6-216ENST00000468949 MT3P25713 68 aa3.28□□□□□ -1.88
HDAC6-216ENST00000468949 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
HDAC6-216ENST00000468949 TNP1P09430 55 aa3.27□□□□□ -1.89
HDAC6-216ENST00000468949 NEBP20929 6669 aa3.25□□□□□ -1.89
HDAC6-216ENST00000468949 MUC12Q9UKN1 5478 aa3.24□□□□□ -1.89
HDAC6-216ENST00000468949 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
HDAC6-216ENST00000468949 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
HDAC6-216ENST00000468949 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
HDAC6-216ENST00000468949 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
HDAC6-216ENST00000468949 KMT2DO14686 5537 aa3.18□□□□□ -1.9
HDAC6-216ENST00000468949 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
HDAC6-216ENST00000468949 MDN1Q9NU22 5596 aa3.15□□□□□ -1.9
HDAC6-216ENST00000468949 SPRR2FQ96RM1 72 aa3.14□□□□□ -1.91
HDAC6-216ENST00000468949 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
HDAC6-216ENST00000468949 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
HDAC6-216ENST00000468949 SPRR2EP22531 72 aa3.1□□□□□ -1.91
HDAC6-216ENST00000468949 SPRR2BP35325 72 aa3.1□□□□□ -1.91
HDAC6-216ENST00000468949 SPRR2AP35326 72 aa3.1□□□□□ -1.91
HDAC6-216ENST00000468949 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
HDAC6-216ENST00000468949 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
HDAC6-216ENST00000468949 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
HDAC6-216ENST00000468949 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
HDAC6-216ENST00000468949 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
HDAC6-216ENST00000468949 SPRR2DP22532 72 aa3□□□□□ -1.93
HDAC6-216ENST00000468949 KRTAP12-3P60328 96 aa3□□□□□ -1.93
HDAC6-216ENST00000468949 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
HDAC6-216ENST00000468949 MT1EP04732 61 aa2.98□□□□□ -1.93
HDAC6-216ENST00000468949 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
HDAC6-216ENST00000468949 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
HDAC6-216ENST00000468949 MT1LQ93083 61 aa2.9□□□□□ -1.95
HDAC6-216ENST00000468949 MT1GP13640 62 aa2.87□□□□□ -1.95
HDAC6-216ENST00000468949 LCE3CQ5T5A8 94 aa2.87□□□□□ -1.95
HDAC6-216ENST00000468949 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
HDAC6-216ENST00000468949 MT1MQ8N339 61 aa2.82□□□□□ -1.96
HDAC6-216ENST00000468949 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
HDAC6-216ENST00000468949 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
HDAC6-216ENST00000468949 INE1O15225 51 aa2.72□□□□□ -1.97
HDAC6-216ENST00000468949 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
HDAC6-216ENST00000468949 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
HDAC6-216ENST00000468949 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
HDAC6-216ENST00000468949 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
HDAC6-216ENST00000468949 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
HDAC6-216ENST00000468949 MT4P47944 62 aa2.6□□□□□ -1.99
HDAC6-216ENST00000468949 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -1.99
HDAC6-216ENST00000468949 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
HDAC6-216ENST00000468949 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
HDAC6-216ENST00000468949 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
HDAC6-216ENST00000468949 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
HDAC6-216ENST00000468949 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
HDAC6-216ENST00000468949 MT1AP04731 61 aa2.47□□□□□ -2.01
HDAC6-216ENST00000468949 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
HDAC6-216ENST00000468949 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
HDAC6-216ENST00000468949 KRTAP6-1Q3LI64 71 aa2.43□□□□□ -2.02
HDAC6-216ENST00000468949 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
HDAC6-216ENST00000468949 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
HDAC6-216ENST00000468949 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
HDAC6-216ENST00000468949 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
HDAC6-216ENST00000468949 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
HDAC6-216ENST00000468949 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
HDAC6-216ENST00000468949 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
HDAC6-216ENST00000468949 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
HDAC6-216ENST00000468949 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
HDAC6-216ENST00000468949 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
HDAC6-216ENST00000468949 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
HDAC6-216ENST00000468949 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
HDAC6-216ENST00000468949 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
HDAC6-216ENST00000468949 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
HDAC6-216ENST00000468949 PRM1P04553 51 aa1.66□□□□□ -2.14
HDAC6-216ENST00000468949 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
HDAC6-216ENST00000468949 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
HDAC6-216ENST00000468949 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
HDAC6-216ENST00000468949 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
HDAC6-216ENST00000468949 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 487.6 ms