RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
COL27A1-203ENST00000468565 MT1XP80297 61 aa6.07□□□□□ -1.44
COL27A1-203ENST00000468565 KRTAP5-9P26371 169 aa6.06□□□□□ -1.44
COL27A1-203ENST00000468565 NEBP20929 6669 aa6.06□□□□□ -1.44
COL27A1-203ENST00000468565 MUC12Q9UKN1 5478 aa6.04□□□□□ -1.44
COL27A1-203ENST00000468565 CAMK2N1Q7Z7J9 78 aa6.03□□□□□ -1.44
COL27A1-203ENST00000468565 KRTAP4-2Q9BYR5 136 aa5.95□□□□□ -1.46
COL27A1-203ENST00000468565 KMT2DO14686 5537 aa5.93□□□□□ -1.46
COL27A1-203ENST00000468565 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
COL27A1-203ENST00000468565 SPRR2FQ96RM1 72 aa5.86□□□□□ -1.47
COL27A1-203ENST00000468565 MDN1Q9NU22 5596 aa5.85□□□□□ -1.47
COL27A1-203ENST00000468565 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
COL27A1-203ENST00000468565 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
COL27A1-203ENST00000468565 TNP1P09430 55 aa5.8□□□□□ -1.48
COL27A1-203ENST00000468565 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
COL27A1-203ENST00000468565 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
COL27A1-203ENST00000468565 LCE1AQ5T7P2 110 aa5.77□□□□□ -1.49
COL27A1-203ENST00000468565 SPRR2EP22531 72 aa5.76□□□□□ -1.49
COL27A1-203ENST00000468565 SPRR2BP35325 72 aa5.76□□□□□ -1.49
COL27A1-203ENST00000468565 SPRR2AP35326 72 aa5.76□□□□□ -1.49
COL27A1-203ENST00000468565 KRTAP2-3P0C7H8 128 aa5.7□□□□□ -1.5
COL27A1-203ENST00000468565 KRTAP2-4Q9BYR9 128 aa5.7□□□□□ -1.5
COL27A1-203ENST00000468565 SPRR2DP22532 72 aa5.58□□□□□ -1.52
COL27A1-203ENST00000468565 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
COL27A1-203ENST00000468565 KRTAP2-2Q9BYT5 123 aa5.52□□□□□ -1.53
COL27A1-203ENST00000468565 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
COL27A1-203ENST00000468565 INE1O15225 51 aa5.48□□□□□ -1.53
COL27A1-203ENST00000468565 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
COL27A1-203ENST00000468565 KRTAP19-7Q3SYF9 63 aa5.42□□□□□ -1.54
COL27A1-203ENST00000468565 KRTAP5-3Q6L8H2 238 aa5.4□□□□□ -1.55
COL27A1-203ENST00000468565 MT1EP04732 61 aa5.38□□□□□ -1.55
COL27A1-203ENST00000468565 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
COL27A1-203ENST00000468565 KRTAP19-5Q3LI72 72 aa5.29□□□□□ -1.56
COL27A1-203ENST00000468565 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
COL27A1-203ENST00000468565 MT1GP13640 62 aa5.21□□□□□ -1.57
COL27A1-203ENST00000468565 MT3P25713 68 aa5.17□□□□□ -1.58
COL27A1-203ENST00000468565 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
COL27A1-203ENST00000468565 MT1LQ93083 61 aa5.14□□□□□ -1.59
COL27A1-203ENST00000468565 LCE1FQ5T754 118 aa5.12□□□□□ -1.59
COL27A1-203ENST00000468565 MT1MQ8N339 61 aa5.11□□□□□ -1.59
COL27A1-203ENST00000468565 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
COL27A1-203ENST00000468565 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
COL27A1-203ENST00000468565 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
COL27A1-203ENST00000468565 MT4P47944 62 aa4.85□□□□□ -1.63
COL27A1-203ENST00000468565 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
COL27A1-203ENST00000468565 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
COL27A1-203ENST00000468565 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
COL27A1-203ENST00000468565 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
COL27A1-203ENST00000468565 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
COL27A1-203ENST00000468565 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
COL27A1-203ENST00000468565 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
COL27A1-203ENST00000468565 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
COL27A1-203ENST00000468565 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
COL27A1-203ENST00000468565 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.7
COL27A1-203ENST00000468565 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
COL27A1-203ENST00000468565 MT1AP04731 61 aa4.38□□□□□ -1.71
COL27A1-203ENST00000468565 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
COL27A1-203ENST00000468565 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
COL27A1-203ENST00000468565 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
COL27A1-203ENST00000468565 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
COL27A1-203ENST00000468565 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
COL27A1-203ENST00000468565 KRTAP5-8O75690 187 aa4.03□□□□□ -1.76
COL27A1-203ENST00000468565 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
COL27A1-203ENST00000468565 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
COL27A1-203ENST00000468565 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
COL27A1-203ENST00000468565 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
COL27A1-203ENST00000468565 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
COL27A1-203ENST00000468565 AHNAKQ09666 5890 aaKnown RBP3.79□□□□□ -1.8
COL27A1-203ENST00000468565 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
COL27A1-203ENST00000468565 PRM1P04553 51 aa3.5□□□□□ -1.85
COL27A1-203ENST00000468565 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
COL27A1-203ENST00000468565 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
COL27A1-203ENST00000468565 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
COL27A1-203ENST00000468565 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
COL27A1-203ENST00000468565 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
COL27A1-203ENST00000468565 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
COL27A1-203ENST00000468565 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
COL27A1-203ENST00000468565 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 228 ms