RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 MT1BP07438 61 aa3.09□□□□□ -1.91
MSL3-210ENST00000468149 C10orf95Q9H7T3 257 aa3.09□□□□□ -1.91
MSL3-210ENST00000468149 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
MSL3-210ENST00000468149 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
MSL3-210ENST00000468149 KRTAP10-12P60413 245 aa3.06□□□□□ -1.92
MSL3-210ENST00000468149 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
MSL3-210ENST00000468149 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
MSL3-210ENST00000468149 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
MSL3-210ENST00000468149 KRTAP13-4Q3LI77 160 aa3.04□□□□□ -1.92
MSL3-210ENST00000468149 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
MSL3-210ENST00000468149 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
MSL3-210ENST00000468149 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
MSL3-210ENST00000468149 M0QZ58 72 aa3.01□□□□□ -1.93
MSL3-210ENST00000468149 MACF1Q9UPN3 7388 aaKnown RBP2.97□□□□□ -1.93
MSL3-210ENST00000468149 MT1XP80297 61 aa2.93□□□□□ -1.94
MSL3-210ENST00000468149 KRTAP2-3P0C7H8 128 aa2.91□□□□□ -1.94
MSL3-210ENST00000468149 KRTAP2-4Q9BYR9 128 aa2.91□□□□□ -1.94
MSL3-210ENST00000468149 A0A0D9SG42 100 aa2.87□□□□□ -1.95
MSL3-210ENST00000468149 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
MSL3-210ENST00000468149 KRTAP10-7P60409 375 aaPredicted RBP2.84□□□□□ -1.95
MSL3-210ENST00000468149 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
MSL3-210ENST00000468149 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
MSL3-210ENST00000468149 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
MSL3-210ENST00000468149 KMT2DO14686 5537 aa2.79□□□□□ -1.96
MSL3-210ENST00000468149 KRTAP8-1Q8IUC2 63 aa2.79□□□□□ -1.96
MSL3-210ENST00000468149 KRTAP2-1Q9BYU5 128 aa2.77□□□□□ -1.97
MSL3-210ENST00000468149 MUC12Q9UKN1 5478 aa2.76□□□□□ -1.97
MSL3-210ENST00000468149 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
MSL3-210ENST00000468149 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
MSL3-210ENST00000468149 SPRR2EP22531 72 aa2.69□□□□□ -1.98
MSL3-210ENST00000468149 SPRR2BP35325 72 aa2.69□□□□□ -1.98
MSL3-210ENST00000468149 SPRR2AP35326 72 aa2.69□□□□□ -1.98
MSL3-210ENST00000468149 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
MSL3-210ENST00000468149 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
MSL3-210ENST00000468149 TNP1P09430 55 aa2.62□□□□□ -1.99
MSL3-210ENST00000468149 KRTAP19-7Q3SYF9 63 aa2.62□□□□□ -1.99
MSL3-210ENST00000468149 SPRR2DP22532 72 aa2.6□□□□□ -1.99
MSL3-210ENST00000468149 MT1EP04732 61 aa2.58□□□□□ -2
MSL3-210ENST00000468149 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
MSL3-210ENST00000468149 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
MSL3-210ENST00000468149 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
MSL3-210ENST00000468149 LCE3AQ5TA76 89 aa2.55□□□□□ -2
MSL3-210ENST00000468149 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
MSL3-210ENST00000468149 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
MSL3-210ENST00000468149 KRTAP12-4P60329 112 aa2.53□□□□□ -2
MSL3-210ENST00000468149 MT1GP13640 62 aa2.52□□□□□ -2.01
MSL3-210ENST00000468149 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
MSL3-210ENST00000468149 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
MSL3-210ENST00000468149 MT1LQ93083 61 aa2.49□□□□□ -2.01
MSL3-210ENST00000468149 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
MSL3-210ENST00000468149 MT1MQ8N339 61 aa2.46□□□□□ -2.02
MSL3-210ENST00000468149 DSTQ03001 7570 aaKnown RBP2.44□□□□□ -2.02
MSL3-210ENST00000468149 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
MSL3-210ENST00000468149 KRTAP4-3Q9BYR4 195 aa2.36□□□□□ -2.03
MSL3-210ENST00000468149 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
MSL3-210ENST00000468149 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
MSL3-210ENST00000468149 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.05
MSL3-210ENST00000468149 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
MSL3-210ENST00000468149 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
MSL3-210ENST00000468149 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
MSL3-210ENST00000468149 MT4P47944 62 aa2.25□□□□□ -2.05
MSL3-210ENST00000468149 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
MSL3-210ENST00000468149 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
MSL3-210ENST00000468149 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
MSL3-210ENST00000468149 MT1AP04731 61 aa2.12□□□□□ -2.07
MSL3-210ENST00000468149 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
MSL3-210ENST00000468149 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.08
MSL3-210ENST00000468149 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
MSL3-210ENST00000468149 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
MSL3-210ENST00000468149 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.1
MSL3-210ENST00000468149 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
MSL3-210ENST00000468149 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
MSL3-210ENST00000468149 PRM1P04553 51 aa1.79□□□□□ -2.12
MSL3-210ENST00000468149 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
MSL3-210ENST00000468149 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
MSL3-210ENST00000468149 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
MSL3-210ENST00000468149 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
MSL3-210ENST00000468149 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 63.1 ms