RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
RNF13-208ENST00000467996 KMT2DO14686 5537 aa4.58□□□□□ -1.68
RNF13-208ENST00000467996 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
RNF13-208ENST00000467996 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
RNF13-208ENST00000467996 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
RNF13-208ENST00000467996 KRTAP5-9P26371 169 aa4.47□□□□□ -1.69
RNF13-208ENST00000467996 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
RNF13-208ENST00000467996 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
RNF13-208ENST00000467996 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
RNF13-208ENST00000467996 KRTAP19-7Q3SYF9 63 aa4.42□□□□□ -1.7
RNF13-208ENST00000467996 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
RNF13-208ENST00000467996 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
RNF13-208ENST00000467996 MT1EP04732 61 aa4.36□□□□□ -1.71
RNF13-208ENST00000467996 NEBP20929 6669 aa4.35□□□□□ -1.71
RNF13-208ENST00000467996 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
RNF13-208ENST00000467996 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
RNF13-208ENST00000467996 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
RNF13-208ENST00000467996 SPRR2EP22531 72 aa4.31□□□□□ -1.72
RNF13-208ENST00000467996 SPRR2BP35325 72 aa4.31□□□□□ -1.72
RNF13-208ENST00000467996 SPRR2AP35326 72 aa4.31□□□□□ -1.72
RNF13-208ENST00000467996 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
RNF13-208ENST00000467996 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
RNF13-208ENST00000467996 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
RNF13-208ENST00000467996 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
RNF13-208ENST00000467996 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
RNF13-208ENST00000467996 MT1LQ93083 61 aa4.24□□□□□ -1.73
RNF13-208ENST00000467996 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
RNF13-208ENST00000467996 SPRR2DP22532 72 aa4.18□□□□□ -1.74
RNF13-208ENST00000467996 MT1GP13640 62 aa4.16□□□□□ -1.74
RNF13-208ENST00000467996 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.75
RNF13-208ENST00000467996 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
RNF13-208ENST00000467996 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
RNF13-208ENST00000467996 MT1MQ8N339 61 aa4.12□□□□□ -1.75
RNF13-208ENST00000467996 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
RNF13-208ENST00000467996 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
RNF13-208ENST00000467996 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
RNF13-208ENST00000467996 MT3P25713 68 aa3.94□□□□□ -1.78
RNF13-208ENST00000467996 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
RNF13-208ENST00000467996 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
RNF13-208ENST00000467996 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
RNF13-208ENST00000467996 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
RNF13-208ENST00000467996 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
RNF13-208ENST00000467996 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
RNF13-208ENST00000467996 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
RNF13-208ENST00000467996 MT1AP04731 61 aa3.61□□□□□ -1.83
RNF13-208ENST00000467996 MT4P47944 62 aa3.61□□□□□ -1.83
RNF13-208ENST00000467996 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
RNF13-208ENST00000467996 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
RNF13-208ENST00000467996 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
RNF13-208ENST00000467996 KRTAP12-4P60329 112 aa3.51□□□□□ -1.85
RNF13-208ENST00000467996 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
RNF13-208ENST00000467996 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
RNF13-208ENST00000467996 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.85
RNF13-208ENST00000467996 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
RNF13-208ENST00000467996 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
RNF13-208ENST00000467996 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
RNF13-208ENST00000467996 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
RNF13-208ENST00000467996 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
RNF13-208ENST00000467996 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
RNF13-208ENST00000467996 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
RNF13-208ENST00000467996 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
RNF13-208ENST00000467996 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
RNF13-208ENST00000467996 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
RNF13-208ENST00000467996 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
RNF13-208ENST00000467996 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
RNF13-208ENST00000467996 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
RNF13-208ENST00000467996 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
RNF13-208ENST00000467996 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
RNF13-208ENST00000467996 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
RNF13-208ENST00000467996 INE1O15225 51 aa2.71□□□□□ -1.98
RNF13-208ENST00000467996 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
RNF13-208ENST00000467996 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
RNF13-208ENST00000467996 PRM1P04553 51 aa2.42□□□□□ -2.02
RNF13-208ENST00000467996 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
RNF13-208ENST00000467996 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
RNF13-208ENST00000467996 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
RNF13-208ENST00000467996 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
RNF13-208ENST00000467996 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 7.7 ms