RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.66
SRM-203ENST00000465788 MT1GP13640 62 aa4.7□□□□□ -1.66
SRM-203ENST00000465788 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
SRM-203ENST00000465788 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
SRM-203ENST00000465788 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
SRM-203ENST00000465788 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
SRM-203ENST00000465788 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
SRM-203ENST00000465788 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
SRM-203ENST00000465788 TNP1P09430 55 aa4.61□□□□□ -1.67
SRM-203ENST00000465788 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
SRM-203ENST00000465788 MT1MQ8N339 61 aa4.56□□□□□ -1.68
SRM-203ENST00000465788 BRK1Q8WUW1 75 aa4.56□□□□□ -1.68
SRM-203ENST00000465788 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
SRM-203ENST00000465788 MT1LQ93083 61 aa4.54□□□□□ -1.68
SRM-203ENST00000465788 MT4P47944 62 aa4.53□□□□□ -1.68
SRM-203ENST00000465788 ROMO1P60602 79 aa4.51□□□□□ -1.69
SRM-203ENST00000465788 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
SRM-203ENST00000465788 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
SRM-203ENST00000465788 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
SRM-203ENST00000465788 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
SRM-203ENST00000465788 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
SRM-203ENST00000465788 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
SRM-203ENST00000465788 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
SRM-203ENST00000465788 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
SRM-203ENST00000465788 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
SRM-203ENST00000465788 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
SRM-203ENST00000465788 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
SRM-203ENST00000465788 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
SRM-203ENST00000465788 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
SRM-203ENST00000465788 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
SRM-203ENST00000465788 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
SRM-203ENST00000465788 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
SRM-203ENST00000465788 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
SRM-203ENST00000465788 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
SRM-203ENST00000465788 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
SRM-203ENST00000465788 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
SRM-203ENST00000465788 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
SRM-203ENST00000465788 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
SRM-203ENST00000465788 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
SRM-203ENST00000465788 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
SRM-203ENST00000465788 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
SRM-203ENST00000465788 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
SRM-203ENST00000465788 H3BS24 57 aa3.9□□□□□ -1.79
SRM-203ENST00000465788 MT1AP04731 61 aa3.89□□□□□ -1.79
SRM-203ENST00000465788 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
SRM-203ENST00000465788 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
SRM-203ENST00000465788 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
SRM-203ENST00000465788 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
SRM-203ENST00000465788 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
SRM-203ENST00000465788 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
SRM-203ENST00000465788 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
SRM-203ENST00000465788 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
SRM-203ENST00000465788 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.82
SRM-203ENST00000465788 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
SRM-203ENST00000465788 MT3P25713 68 aa3.59□□□□□ -1.83
SRM-203ENST00000465788 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
SRM-203ENST00000465788 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
SRM-203ENST00000465788 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
SRM-203ENST00000465788 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
SRM-203ENST00000465788 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
SRM-203ENST00000465788 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
SRM-203ENST00000465788 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
SRM-203ENST00000465788 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
SRM-203ENST00000465788 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
SRM-203ENST00000465788 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
SRM-203ENST00000465788 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
SRM-203ENST00000465788 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SRM-203ENST00000465788 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
SRM-203ENST00000465788 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
SRM-203ENST00000465788 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
SRM-203ENST00000465788 PHGR1C9JFL3 82 aa2.57□□□□□ -2
SRM-203ENST00000465788 INE1O15225 51 aa2.56□□□□□ -2
SRM-203ENST00000465788 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
SRM-203ENST00000465788 PRM1P04553 51 aa2.31□□□□□ -2.04
SRM-203ENST00000465788 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
SRM-203ENST00000465788 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
SRM-203ENST00000465788 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
SRM-203ENST00000465788 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 73.2 ms