RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
UBE4B-205ENST00000465408 AHNAK2Q8IVF2 5795 aa3.51□□□□□ -1.85
UBE4B-205ENST00000465408 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
UBE4B-205ENST00000465408 MT1BP07438 61 aa3.49□□□□□ -1.85
UBE4B-205ENST00000465408 LCE3BQ5TA77 95 aa3.49□□□□□ -1.85
UBE4B-205ENST00000465408 SPRR2DP22532 72 aa3.46□□□□□ -1.86
UBE4B-205ENST00000465408 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
UBE4B-205ENST00000465408 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
UBE4B-205ENST00000465408 TNP1P09430 55 aa3.43□□□□□ -1.86
UBE4B-205ENST00000465408 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
UBE4B-205ENST00000465408 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
UBE4B-205ENST00000465408 SPRR2FQ96RM1 72 aa3.42□□□□□ -1.86
UBE4B-205ENST00000465408 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
UBE4B-205ENST00000465408 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
UBE4B-205ENST00000465408 MT1XP80297 61 aa3.4□□□□□ -1.87
UBE4B-205ENST00000465408 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
UBE4B-205ENST00000465408 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
UBE4B-205ENST00000465408 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
UBE4B-205ENST00000465408 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
UBE4B-205ENST00000465408 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
UBE4B-205ENST00000465408 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
UBE4B-205ENST00000465408 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
UBE4B-205ENST00000465408 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
UBE4B-205ENST00000465408 PRO2289Q9P1D8 64 aa3.29□□□□□ -1.88
UBE4B-205ENST00000465408 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
UBE4B-205ENST00000465408 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
UBE4B-205ENST00000465408 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
UBE4B-205ENST00000465408 KRTAP8-1Q8IUC2 63 aa3.2□□□□□ -1.9
UBE4B-205ENST00000465408 KRTAP12-3P60328 96 aa3.15□□□□□ -1.91
UBE4B-205ENST00000465408 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
UBE4B-205ENST00000465408 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
UBE4B-205ENST00000465408 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
UBE4B-205ENST00000465408 MT4P47944 62 aa3.1□□□□□ -1.91
UBE4B-205ENST00000465408 KRTAP4-7Q9BYR0 210 aa3.1□□□□□ -1.91
UBE4B-205ENST00000465408 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
UBE4B-205ENST00000465408 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
UBE4B-205ENST00000465408 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
UBE4B-205ENST00000465408 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
UBE4B-205ENST00000465408 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
UBE4B-205ENST00000465408 LUZP6Q538Z0 58 aa3□□□□□ -1.93
UBE4B-205ENST00000465408 MT1EP04732 61 aa2.97□□□□□ -1.93
UBE4B-205ENST00000465408 MT3P25713 68 aa2.95□□□□□ -1.94
UBE4B-205ENST00000465408 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
UBE4B-205ENST00000465408 MT1LQ93083 61 aa2.93□□□□□ -1.94
UBE4B-205ENST00000465408 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
UBE4B-205ENST00000465408 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
UBE4B-205ENST00000465408 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
UBE4B-205ENST00000465408 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
UBE4B-205ENST00000465408 MT1MQ8N339 61 aa2.8□□□□□ -1.96
UBE4B-205ENST00000465408 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
UBE4B-205ENST00000465408 MT1GP13640 62 aa2.77□□□□□ -1.97
UBE4B-205ENST00000465408 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
UBE4B-205ENST00000465408 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
UBE4B-205ENST00000465408 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
UBE4B-205ENST00000465408 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
UBE4B-205ENST00000465408 MT1AP04731 61 aa2.48□□□□□ -2.01
UBE4B-205ENST00000465408 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
UBE4B-205ENST00000465408 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
UBE4B-205ENST00000465408 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
UBE4B-205ENST00000465408 INE1O15225 51 aa2.47□□□□□ -2.01
UBE4B-205ENST00000465408 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
UBE4B-205ENST00000465408 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
UBE4B-205ENST00000465408 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
UBE4B-205ENST00000465408 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
UBE4B-205ENST00000465408 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
UBE4B-205ENST00000465408 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
UBE4B-205ENST00000465408 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
UBE4B-205ENST00000465408 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
UBE4B-205ENST00000465408 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
UBE4B-205ENST00000465408 PRM1P04553 51 aa1.99□□□□□ -2.09
UBE4B-205ENST00000465408 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
UBE4B-205ENST00000465408 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
UBE4B-205ENST00000465408 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
UBE4B-205ENST00000465408 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
UBE4B-205ENST00000465408 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
UBE4B-205ENST00000465408 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
UBE4B-205ENST00000465408 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
UBE4B-205ENST00000465408 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 59.6 ms