RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 LINC00304Q8N9R0 145 aa2.53□□□□□ -2
CACNA1C-223ENST00000465278 IGKV2-24A0A0C4DH68 120 aa2.52□□□□□ -2.01
CACNA1C-223ENST00000465278 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
CACNA1C-223ENST00000465278 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
CACNA1C-223ENST00000465278 KRTAP19-2Q3LHN2 52 aa2.5□□□□□ -2.01
CACNA1C-223ENST00000465278 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
CACNA1C-223ENST00000465278 PRLHP81277 87 aa2.48□□□□□ -2.01
CACNA1C-223ENST00000465278 COX6B2Q6YFQ2 88 aa2.48□□□□□ -2.01
CACNA1C-223ENST00000465278 FLGP20930 4061 aaPredicted RBP2.48□□□□□ -2.01
CACNA1C-223ENST00000465278 KRTAP4-1Q9BYQ7 146 aa2.47□□□□□ -2.01
CACNA1C-223ENST00000465278 WFDC13Q8IUB5 93 aa2.46□□□□□ -2.02
CACNA1C-223ENST00000465278 DSTQ03001 7570 aaKnown RBP2.46□□□□□ -2.02
CACNA1C-223ENST00000465278 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
CACNA1C-223ENST00000465278 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
CACNA1C-223ENST00000465278 PCOTHQ58A44 107 aa2.44□□□□□ -2.02
CACNA1C-223ENST00000465278 SSBP3-AS1Q7Z2R9 100 aa2.44□□□□□ -2.02
CACNA1C-223ENST00000465278 MMP24-AS1A0A0U1RRL7 71 aa2.43□□□□□ -2.02
CACNA1C-223ENST00000465278 M0R2T5 61 aa2.43□□□□□ -2.02
CACNA1C-223ENST00000465278 SPINK6Q6UWN8 80 aa2.42□□□□□ -2.02
CACNA1C-223ENST00000465278 DEFB105AQ8NG35 78 aa2.42□□□□□ -2.02
CACNA1C-223ENST00000465278 MRPL34Q9BQ48 92 aaKnown RBP2.41□□□□□ -2.02
CACNA1C-223ENST00000465278 INE1O15225 51 aa2.4□□□□□ -2.03
CACNA1C-223ENST00000465278 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
CACNA1C-223ENST00000465278 RPS29P62273 56 aaKnown RBP2.39□□□□□ -2.03
CACNA1C-223ENST00000465278 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
CACNA1C-223ENST00000465278 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
CACNA1C-223ENST00000465278 PLAC4Q8WY50 150 aa2.38□□□□□ -2.03
CACNA1C-223ENST00000465278 H0YAA0 97 aa2.37□□□□□ -2.03
CACNA1C-223ENST00000465278 TPRXLQ17RH7 258 aa2.37□□□□□ -2.03
CACNA1C-223ENST00000465278 CRIPTQ9P021 101 aa2.37□□□□□ -2.03
CACNA1C-223ENST00000465278 R4GN34 69 aa2.37□□□□□ -2.03
CACNA1C-223ENST00000465278 SPINK1P00995 79 aa2.35□□□□□ -2.03
CACNA1C-223ENST00000465278 SPRR2EP22531 72 aa2.35□□□□□ -2.03
CACNA1C-223ENST00000465278 SPRR2BP35325 72 aa2.35□□□□□ -2.03
CACNA1C-223ENST00000465278 SPRR2AP35326 72 aa2.35□□□□□ -2.03
CACNA1C-223ENST00000465278 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
CACNA1C-223ENST00000465278 H1FX-AS1Q4G0G2 97 aa2.32□□□□□ -2.04
CACNA1C-223ENST00000465278 RPL37P61927 97 aaKnown RBP2.3□□□□□ -2.04
CACNA1C-223ENST00000465278 SPRR2DP22532 72 aa2.28□□□□□ -2.04
CACNA1C-223ENST00000465278 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
CACNA1C-223ENST00000465278 MT2AP02795 61 aa2.21□□□□□ -2.06
CACNA1C-223ENST00000465278 MT1FP04733 61 aa2.2□□□□□ -2.06
CACNA1C-223ENST00000465278 SPRR2FQ96RM1 72 aa2.18□□□□□ -2.06
CACNA1C-223ENST00000465278 C9orf92A6NGG3 77 aa2.16□□□□□ -2.06
CACNA1C-223ENST00000465278 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
CACNA1C-223ENST00000465278 C10orf95Q9H7T3 257 aa2.16□□□□□ -2.06
CACNA1C-223ENST00000465278 S4R3F8 94 aa2.12□□□□□ -2.07
CACNA1C-223ENST00000465278 MT4P47944 62 aa2.05□□□□□ -2.08
CACNA1C-223ENST00000465278 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
CACNA1C-223ENST00000465278 M0QZ58 72 aa2.02□□□□□ -2.09
CACNA1C-223ENST00000465278 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
CACNA1C-223ENST00000465278 KRTAP12-1P59990 96 aa2.01□□□□□ -2.09
CACNA1C-223ENST00000465278 KRTAP13-4Q3LI77 160 aa1.97□□□□□ -2.09
CACNA1C-223ENST00000465278 A0A0D9SG42 100 aa1.96□□□□□ -2.1
CACNA1C-223ENST00000465278 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
CACNA1C-223ENST00000465278 KRTAP8-1Q8IUC2 63 aa1.9□□□□□ -2.11
CACNA1C-223ENST00000465278 SPRR2GQ9BYE4 73 aa1.86□□□□□ -2.11
CACNA1C-223ENST00000465278 KRTAP19-8Q3LI54 63 aa1.82□□□□□ -2.12
CACNA1C-223ENST00000465278 MT1BP07438 61 aa1.81□□□□□ -2.12
CACNA1C-223ENST00000465278 TNP1P09430 55 aa1.79□□□□□ -2.12
CACNA1C-223ENST00000465278 KRTAP20-2Q3LI61 65 aa1.75□□□□□ -2.13
CACNA1C-223ENST00000465278 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
CACNA1C-223ENST00000465278 MT1XP80297 61 aa1.71□□□□□ -2.14
CACNA1C-223ENST00000465278 SYNE1Q8NF91 8797 aaKnown RBP1.65□□□□□ -2.14
CACNA1C-223ENST00000465278 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
CACNA1C-223ENST00000465278 KRTAP19-3Q7Z4W3 81 aa1.53□□□□□ -2.16
CACNA1C-223ENST00000465278 MT1EP04732 61 aa1.5□□□□□ -2.17
CACNA1C-223ENST00000465278 KRTAP19-5Q3LI72 72 aa1.5□□□□□ -2.17
CACNA1C-223ENST00000465278 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
CACNA1C-223ENST00000465278 MT1LQ93083 61 aa1.47□□□□□ -2.17
CACNA1C-223ENST00000465278 MT1GP13640 62 aa1.44□□□□□ -2.18
CACNA1C-223ENST00000465278 MT1MQ8N339 61 aa1.4□□□□□ -2.19
CACNA1C-223ENST00000465278 MT1AP04731 61 aa1.28□□□□□ -2.2
CACNA1C-223ENST00000465278 PRM1P04553 51 aa1.27□□□□□ -2.21
CACNA1C-223ENST00000465278 KRTAP6-1Q3LI64 71 aa1.22□□□□□ -2.21
CACNA1C-223ENST00000465278 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
CACNA1C-223ENST00000465278 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
CACNA1C-223ENST00000465278 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 58.8 ms