RNA–Protein interactions for RNA: ENST00000463084.1

COL4A2-204, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-204ENST00000463084 ROMO1P60602 79 aa4.97□□□□□ -1.61
COL4A2-204ENST00000463084 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
COL4A2-204ENST00000463084 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
COL4A2-204ENST00000463084 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
COL4A2-204ENST00000463084 LCE5AQ5TCM9 118 aa4.89□□□□□ -1.63
COL4A2-204ENST00000463084 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
COL4A2-204ENST00000463084 MT1EP04732 61 aa4.86□□□□□ -1.63
COL4A2-204ENST00000463084 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
COL4A2-204ENST00000463084 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
COL4A2-204ENST00000463084 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
COL4A2-204ENST00000463084 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
COL4A2-204ENST00000463084 MT4P47944 62 aa4.79□□□□□ -1.64
COL4A2-204ENST00000463084 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
COL4A2-204ENST00000463084 TNP1P09430 55 aa4.76□□□□□ -1.65
COL4A2-204ENST00000463084 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
COL4A2-204ENST00000463084 KRTAP19-5Q3LI72 72 aa4.74□□□□□ -1.65
COL4A2-204ENST00000463084 MT1GP13640 62 aa4.73□□□□□ -1.65
COL4A2-204ENST00000463084 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
COL4A2-204ENST00000463084 MT1MQ8N339 61 aa4.66□□□□□ -1.66
COL4A2-204ENST00000463084 HMCN1Q96RW7 5635 aa4.62□□□□□ -1.67
COL4A2-204ENST00000463084 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
COL4A2-204ENST00000463084 MT1LQ93083 61 aa4.61□□□□□ -1.67
COL4A2-204ENST00000463084 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
COL4A2-204ENST00000463084 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
COL4A2-204ENST00000463084 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
COL4A2-204ENST00000463084 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
COL4A2-204ENST00000463084 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
COL4A2-204ENST00000463084 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
COL4A2-204ENST00000463084 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
COL4A2-204ENST00000463084 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
COL4A2-204ENST00000463084 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
COL4A2-204ENST00000463084 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
COL4A2-204ENST00000463084 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
COL4A2-204ENST00000463084 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
COL4A2-204ENST00000463084 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
COL4A2-204ENST00000463084 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
COL4A2-204ENST00000463084 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
COL4A2-204ENST00000463084 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
COL4A2-204ENST00000463084 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
COL4A2-204ENST00000463084 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
COL4A2-204ENST00000463084 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
COL4A2-204ENST00000463084 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
COL4A2-204ENST00000463084 MT1AP04731 61 aa3.92□□□□□ -1.78
COL4A2-204ENST00000463084 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
COL4A2-204ENST00000463084 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
COL4A2-204ENST00000463084 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
COL4A2-204ENST00000463084 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
COL4A2-204ENST00000463084 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
COL4A2-204ENST00000463084 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
COL4A2-204ENST00000463084 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
COL4A2-204ENST00000463084 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
COL4A2-204ENST00000463084 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
COL4A2-204ENST00000463084 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
COL4A2-204ENST00000463084 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
COL4A2-204ENST00000463084 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.81
COL4A2-204ENST00000463084 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.81
COL4A2-204ENST00000463084 MT3P25713 68 aa3.62□□□□□ -1.83
COL4A2-204ENST00000463084 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
COL4A2-204ENST00000463084 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
COL4A2-204ENST00000463084 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
COL4A2-204ENST00000463084 H3BS24 57 aa3.29□□□□□ -1.88
COL4A2-204ENST00000463084 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
COL4A2-204ENST00000463084 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
COL4A2-204ENST00000463084 INE1O15225 51 aa3.15□□□□□ -1.91
COL4A2-204ENST00000463084 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
COL4A2-204ENST00000463084 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
COL4A2-204ENST00000463084 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
COL4A2-204ENST00000463084 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
COL4A2-204ENST00000463084 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
COL4A2-204ENST00000463084 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
COL4A2-204ENST00000463084 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
COL4A2-204ENST00000463084 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
COL4A2-204ENST00000463084 PRM1P04553 51 aa2.6□□□□□ -1.99
COL4A2-204ENST00000463084 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
COL4A2-204ENST00000463084 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
COL4A2-204ENST00000463084 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
COL4A2-204ENST00000463084 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
COL4A2-204ENST00000463084 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 43.5 ms