RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 TNP1P09430 55 aa4.46□□□□□ -1.7
TRAF3IP1-204ENST00000462122 SPRR2EP22531 72 aa4.43□□□□□ -1.7
TRAF3IP1-204ENST00000462122 SPRR2BP35325 72 aa4.43□□□□□ -1.7
TRAF3IP1-204ENST00000462122 SPRR2AP35326 72 aa4.43□□□□□ -1.7
TRAF3IP1-204ENST00000462122 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
TRAF3IP1-204ENST00000462122 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
TRAF3IP1-204ENST00000462122 CDC42SE1Q9NRR8 79 aa4.35□□□□□ -1.71
TRAF3IP1-204ENST00000462122 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
TRAF3IP1-204ENST00000462122 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
TRAF3IP1-204ENST00000462122 MT1EP04732 61 aa4.32□□□□□ -1.72
TRAF3IP1-204ENST00000462122 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
TRAF3IP1-204ENST00000462122 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
TRAF3IP1-204ENST00000462122 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
TRAF3IP1-204ENST00000462122 SPRR2DP22532 72 aa4.29□□□□□ -1.72
TRAF3IP1-204ENST00000462122 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
TRAF3IP1-204ENST00000462122 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
TRAF3IP1-204ENST00000462122 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
TRAF3IP1-204ENST00000462122 ROMO1P60602 79 aa4.22□□□□□ -1.73
TRAF3IP1-204ENST00000462122 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
TRAF3IP1-204ENST00000462122 MT1GP13640 62 aa4.18□□□□□ -1.74
TRAF3IP1-204ENST00000462122 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
TRAF3IP1-204ENST00000462122 MT1LQ93083 61 aa4.17□□□□□ -1.74
TRAF3IP1-204ENST00000462122 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
TRAF3IP1-204ENST00000462122 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
TRAF3IP1-204ENST00000462122 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
TRAF3IP1-204ENST00000462122 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
TRAF3IP1-204ENST00000462122 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
TRAF3IP1-204ENST00000462122 MT1MQ8N339 61 aa4.1□□□□□ -1.75
TRAF3IP1-204ENST00000462122 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
TRAF3IP1-204ENST00000462122 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
TRAF3IP1-204ENST00000462122 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
TRAF3IP1-204ENST00000462122 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
TRAF3IP1-204ENST00000462122 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
TRAF3IP1-204ENST00000462122 PRO0628Q9UI54 55 aa3.79□□□□□ -1.8
TRAF3IP1-204ENST00000462122 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
TRAF3IP1-204ENST00000462122 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
TRAF3IP1-204ENST00000462122 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
TRAF3IP1-204ENST00000462122 MT4P47944 62 aa3.71□□□□□ -1.82
TRAF3IP1-204ENST00000462122 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
TRAF3IP1-204ENST00000462122 SYNE1Q8NF91 8797 aaKnown RBP3.64□□□□□ -1.83
TRAF3IP1-204ENST00000462122 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
TRAF3IP1-204ENST00000462122 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
TRAF3IP1-204ENST00000462122 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
TRAF3IP1-204ENST00000462122 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
TRAF3IP1-204ENST00000462122 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
TRAF3IP1-204ENST00000462122 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
TRAF3IP1-204ENST00000462122 MT1AP04731 61 aa3.55□□□□□ -1.84
TRAF3IP1-204ENST00000462122 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
TRAF3IP1-204ENST00000462122 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
TRAF3IP1-204ENST00000462122 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.85
TRAF3IP1-204ENST00000462122 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
TRAF3IP1-204ENST00000462122 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
TRAF3IP1-204ENST00000462122 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
TRAF3IP1-204ENST00000462122 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
TRAF3IP1-204ENST00000462122 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
TRAF3IP1-204ENST00000462122 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
TRAF3IP1-204ENST00000462122 MT3P25713 68 aa3.26□□□□□ -1.89
TRAF3IP1-204ENST00000462122 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
TRAF3IP1-204ENST00000462122 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
TRAF3IP1-204ENST00000462122 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
TRAF3IP1-204ENST00000462122 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
TRAF3IP1-204ENST00000462122 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
TRAF3IP1-204ENST00000462122 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
TRAF3IP1-204ENST00000462122 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
TRAF3IP1-204ENST00000462122 A0A0A0MQY5 61 aa2.88□□□□□ -1.95
TRAF3IP1-204ENST00000462122 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
TRAF3IP1-204ENST00000462122 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
TRAF3IP1-204ENST00000462122 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
TRAF3IP1-204ENST00000462122 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
TRAF3IP1-204ENST00000462122 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
TRAF3IP1-204ENST00000462122 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
TRAF3IP1-204ENST00000462122 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
TRAF3IP1-204ENST00000462122 INE1O15225 51 aa2.22□□□□□ -2.05
TRAF3IP1-204ENST00000462122 PRM1P04553 51 aa2.15□□□□□ -2.07
TRAF3IP1-204ENST00000462122 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
TRAF3IP1-204ENST00000462122 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
TRAF3IP1-204ENST00000462122 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
TRAF3IP1-204ENST00000462122 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 197.4 ms