RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 UBL5Q9BZL1 73 aa2.37□□□□□ -2.03
LRCH3-210ENST00000461674 FLGP20930 4061 aaPredicted RBP2.37□□□□□ -2.03
LRCH3-210ENST00000461674 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
LRCH3-210ENST00000461674 COX6B2Q6YFQ2 88 aa2.35□□□□□ -2.03
LRCH3-210ENST00000461674 TOMM7Q9P0U1 55 aa2.35□□□□□ -2.03
LRCH3-210ENST00000461674 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
LRCH3-210ENST00000461674 NEBP20929 6669 aa2.34□□□□□ -2.04
LRCH3-210ENST00000461674 CRIPTQ9P021 101 aa2.33□□□□□ -2.04
LRCH3-210ENST00000461674 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
LRCH3-210ENST00000461674 PRLHP81277 87 aa2.31□□□□□ -2.04
LRCH3-210ENST00000461674 K7EQZ3 153 aa2.3□□□□□ -2.04
LRCH3-210ENST00000461674 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
LRCH3-210ENST00000461674 SPRR1AP35321 89 aa2.28□□□□□ -2.04
LRCH3-210ENST00000461674 KCNQ1DNQ9H478 68 aa2.27□□□□□ -2.05
LRCH3-210ENST00000461674 IGLV5-48A0A075B6I7 105 aa2.25□□□□□ -2.05
LRCH3-210ENST00000461674 MT2AP02795 61 aa2.24□□□□□ -2.05
LRCH3-210ENST00000461674 ETDCA0A1B0GVM5 59 aa2.23□□□□□ -2.05
LRCH3-210ENST00000461674 C9orf92A6NGG3 77 aa2.23□□□□□ -2.05
LRCH3-210ENST00000461674 MUC12Q9UKN1 5478 aa2.21□□□□□ -2.05
LRCH3-210ENST00000461674 MT1FP04733 61 aa2.21□□□□□ -2.06
LRCH3-210ENST00000461674 SPRR1BP22528 89 aa2.21□□□□□ -2.06
LRCH3-210ENST00000461674 MRPL34Q9BQ48 92 aaKnown RBP2.19□□□□□ -2.06
LRCH3-210ENST00000461674 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
LRCH3-210ENST00000461674 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
LRCH3-210ENST00000461674 DEFB105AQ8NG35 78 aa2.16□□□□□ -2.06
LRCH3-210ENST00000461674 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
LRCH3-210ENST00000461674 KMT2DO14686 5537 aa2.15□□□□□ -2.06
LRCH3-210ENST00000461674 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
LRCH3-210ENST00000461674 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
LRCH3-210ENST00000461674 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
LRCH3-210ENST00000461674 KRTAP4-3Q9BYR4 195 aa2.11□□□□□ -2.07
LRCH3-210ENST00000461674 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
LRCH3-210ENST00000461674 WFDC13Q8IUB5 93 aa2.09□□□□□ -2.07
LRCH3-210ENST00000461674 MMP24-AS1A0A0U1RRL7 71 aa2.07□□□□□ -2.08
LRCH3-210ENST00000461674 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
LRCH3-210ENST00000461674 SPRR2EP22531 72 aa1.98□□□□□ -2.09
LRCH3-210ENST00000461674 SPRR2BP35325 72 aa1.98□□□□□ -2.09
LRCH3-210ENST00000461674 SPRR2AP35326 72 aa1.98□□□□□ -2.09
LRCH3-210ENST00000461674 KRTAP19-8Q3LI54 63 aa1.98□□□□□ -2.09
LRCH3-210ENST00000461674 MT1BP07438 61 aa1.97□□□□□ -2.09
LRCH3-210ENST00000461674 SPRR2GQ9BYE4 73 aa1.97□□□□□ -2.09
LRCH3-210ENST00000461674 SPRR2FQ96RM1 72 aa1.96□□□□□ -2.1
LRCH3-210ENST00000461674 H1FX-AS1Q4G0G2 97 aa1.95□□□□□ -2.1
LRCH3-210ENST00000461674 SPRR2DP22532 72 aa1.93□□□□□ -2.1
LRCH3-210ENST00000461674 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.11
LRCH3-210ENST00000461674 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
LRCH3-210ENST00000461674 H0YAA0 97 aa1.82□□□□□ -2.12
LRCH3-210ENST00000461674 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
LRCH3-210ENST00000461674 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
LRCH3-210ENST00000461674 MT1XP80297 61 aa1.8□□□□□ -2.12
LRCH3-210ENST00000461674 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
LRCH3-210ENST00000461674 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
LRCH3-210ENST00000461674 S4R3F8 94 aa1.77□□□□□ -2.13
LRCH3-210ENST00000461674 M0QZ58 72 aa1.74□□□□□ -2.13
LRCH3-210ENST00000461674 KRTAP19-3Q7Z4W3 81 aa1.74□□□□□ -2.13
LRCH3-210ENST00000461674 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
LRCH3-210ENST00000461674 MT4P47944 62 aa1.67□□□□□ -2.14
LRCH3-210ENST00000461674 MT1GP13640 62 aa1.64□□□□□ -2.15
LRCH3-210ENST00000461674 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
LRCH3-210ENST00000461674 MT1EP04732 61 aa1.62□□□□□ -2.15
LRCH3-210ENST00000461674 KRTAP19-7Q3SYF9 63 aa1.61□□□□□ -2.15
LRCH3-210ENST00000461674 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
LRCH3-210ENST00000461674 KRTAP20-2Q3LI61 65 aa1.56□□□□□ -2.16
LRCH3-210ENST00000461674 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
LRCH3-210ENST00000461674 MT1MQ8N339 61 aa1.55□□□□□ -2.16
LRCH3-210ENST00000461674 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
LRCH3-210ENST00000461674 TNP1P09430 55 aa1.53□□□□□ -2.16
LRCH3-210ENST00000461674 MT1LQ93083 61 aa1.51□□□□□ -2.17
LRCH3-210ENST00000461674 KRTAP19-5Q3LI72 72 aa1.48□□□□□ -2.17
LRCH3-210ENST00000461674 SYNE1Q8NF91 8797 aaKnown RBP1.46□□□□□ -2.18
LRCH3-210ENST00000461674 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
LRCH3-210ENST00000461674 MT1AP04731 61 aa1.29□□□□□ -2.2
LRCH3-210ENST00000461674 PRM1P04553 51 aa1.27□□□□□ -2.21
LRCH3-210ENST00000461674 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
LRCH3-210ENST00000461674 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
LRCH3-210ENST00000461674 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
LRCH3-210ENST00000461674 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
LRCH3-210ENST00000461674 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 30.6 ms