RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 LCE5AQ5TCM9 118 aa6.61□□□□□ -1.35
TOP3A-202ENST00000461127 MT4P47944 62 aa6.54□□□□□ -1.36
TOP3A-202ENST00000461127 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
TOP3A-202ENST00000461127 KRTAP19-3Q7Z4W3 81 aa6.52□□□□□ -1.37
TOP3A-202ENST00000461127 HMCN1Q96RW7 5635 aa6.52□□□□□ -1.37
TOP3A-202ENST00000461127 KRTAP5-10Q6L8G5 202 aa6.51□□□□□ -1.37
TOP3A-202ENST00000461127 AHNAK2Q8IVF2 5795 aa6.48□□□□□ -1.37
TOP3A-202ENST00000461127 MT1EP04732 61 aa6.42□□□□□ -1.38
TOP3A-202ENST00000461127 KRTAP19-7Q3SYF9 63 aa6.42□□□□□ -1.38
TOP3A-202ENST00000461127 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
TOP3A-202ENST00000461127 PRO0628Q9UI54 55 aa6.37□□□□□ -1.39
TOP3A-202ENST00000461127 KRTAP5-7Q6L8G8 165 aa6.36□□□□□ -1.39
TOP3A-202ENST00000461127 ROMO1P60602 79 aa6.35□□□□□ -1.39
TOP3A-202ENST00000461127 TNP1P09430 55 aa6.33□□□□□ -1.4
TOP3A-202ENST00000461127 MT1GP13640 62 aa6.31□□□□□ -1.4
TOP3A-202ENST00000461127 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
TOP3A-202ENST00000461127 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
TOP3A-202ENST00000461127 KRTAP25-1Q3LHN0 102 aa6.26□□□□□ -1.41
TOP3A-202ENST00000461127 KRTAP4-6Q9BYQ5 205 aa6.25□□□□□ -1.41
TOP3A-202ENST00000461127 KRTAP5-4Q6L8H1 288 aa6.24□□□□□ -1.41
TOP3A-202ENST00000461127 KRTAP5-3Q6L8H2 238 aa6.22□□□□□ -1.41
TOP3A-202ENST00000461127 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
TOP3A-202ENST00000461127 MT1MQ8N339 61 aa6.16□□□□□ -1.42
TOP3A-202ENST00000461127 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
TOP3A-202ENST00000461127 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
TOP3A-202ENST00000461127 MT1LQ93083 61 aa6.03□□□□□ -1.44
TOP3A-202ENST00000461127 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
TOP3A-202ENST00000461127 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
TOP3A-202ENST00000461127 KRTAP20-2Q3LI61 65 aa5.95□□□□□ -1.46
TOP3A-202ENST00000461127 KTN1-AS1Q86SY8 53 aa5.94□□□□□ -1.46
TOP3A-202ENST00000461127 PRAC1Q96KF2 57 aa5.91□□□□□ -1.46
TOP3A-202ENST00000461127 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
TOP3A-202ENST00000461127 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
TOP3A-202ENST00000461127 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
TOP3A-202ENST00000461127 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
TOP3A-202ENST00000461127 SVIPQ8NHG7 77 aa5.67□□□□□ -1.5
TOP3A-202ENST00000461127 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
TOP3A-202ENST00000461127 H3BS24 57 aa5.62□□□□□ -1.51
TOP3A-202ENST00000461127 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
TOP3A-202ENST00000461127 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
TOP3A-202ENST00000461127 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
TOP3A-202ENST00000461127 AHNAKQ09666 5890 aaKnown RBP5.51□□□□□ -1.53
TOP3A-202ENST00000461127 MUC5ACP98088 5654 aa5.5□□□□□ -1.53
TOP3A-202ENST00000461127 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
TOP3A-202ENST00000461127 LOC100996750A0A140TA64 210 aa5.42□□□□□ -1.54
TOP3A-202ENST00000461127 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
TOP3A-202ENST00000461127 MUC5BQ9HC84 5762 aaPredicted RBP5.41□□□□□ -1.54
TOP3A-202ENST00000461127 KRTAP5-2Q701N4 177 aa5.35□□□□□ -1.55
TOP3A-202ENST00000461127 KRTAP9-9Q9BYP9 154 aa5.29□□□□□ -1.56
TOP3A-202ENST00000461127 MT1AP04731 61 aa5.13□□□□□ -1.59
TOP3A-202ENST00000461127 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
TOP3A-202ENST00000461127 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
TOP3A-202ENST00000461127 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
TOP3A-202ENST00000461127 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
TOP3A-202ENST00000461127 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
TOP3A-202ENST00000461127 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
TOP3A-202ENST00000461127 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
TOP3A-202ENST00000461127 KRTAP4-12Q9BQ66 201 aa4.9□□□□□ -1.63
TOP3A-202ENST00000461127 MT3P25713 68 aa4.75□□□□□ -1.65
TOP3A-202ENST00000461127 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
TOP3A-202ENST00000461127 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
TOP3A-202ENST00000461127 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
TOP3A-202ENST00000461127 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
TOP3A-202ENST00000461127 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
TOP3A-202ENST00000461127 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
TOP3A-202ENST00000461127 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
TOP3A-202ENST00000461127 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
TOP3A-202ENST00000461127 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
TOP3A-202ENST00000461127 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
TOP3A-202ENST00000461127 PHGR1C9JFL3 82 aa3.85□□□□□ -1.79
TOP3A-202ENST00000461127 INE1O15225 51 aa3.78□□□□□ -1.8
TOP3A-202ENST00000461127 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
TOP3A-202ENST00000461127 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
TOP3A-202ENST00000461127 PRM1P04553 51 aa3.28□□□□□ -1.88
TOP3A-202ENST00000461127 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
TOP3A-202ENST00000461127 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
TOP3A-202ENST00000461127 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
TOP3A-202ENST00000461127 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 28.9 ms