RNA–Protein interactions for RNA: ENST00000460936.5

NIPSNAP3B-202, Transcript of nipsnap homolog 3B, humanhuman

TSL 5

Gene NIPSNAP3B, Length 1,111 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3B-202ENST00000460936 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
NIPSNAP3B-202ENST00000460936 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
NIPSNAP3B-202ENST00000460936 COX7CP15954 63 aa4.25□□□□□ -1.73
NIPSNAP3B-202ENST00000460936 MT1LQ93083 61 aa4.25□□□□□ -1.73
NIPSNAP3B-202ENST00000460936 COA5Q86WW8 74 aa4.24□□□□□ -1.73
NIPSNAP3B-202ENST00000460936 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
NIPSNAP3B-202ENST00000460936 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
NIPSNAP3B-202ENST00000460936 SERP2Q8N6R1 65 aa4.22□□□□□ -1.73
NIPSNAP3B-202ENST00000460936 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
NIPSNAP3B-202ENST00000460936 A0A1B0GU33 70 aa4.21□□□□□ -1.74
NIPSNAP3B-202ENST00000460936 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
NIPSNAP3B-202ENST00000460936 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
NIPSNAP3B-202ENST00000460936 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
NIPSNAP3B-202ENST00000460936 TMEM258P61165 79 aa4.15□□□□□ -1.75
NIPSNAP3B-202ENST00000460936 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
NIPSNAP3B-202ENST00000460936 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
NIPSNAP3B-202ENST00000460936 RPS28P62857 69 aaKnown RBP4.12□□□□□ -1.75
NIPSNAP3B-202ENST00000460936 SMIM26A0A096LP01 95 aa4.11□□□□□ -1.75
NIPSNAP3B-202ENST00000460936 TNP1P09430 55 aa4.11□□□□□ -1.75
NIPSNAP3B-202ENST00000460936 H7BZZ5 65 aa4.07□□□□□ -1.76
NIPSNAP3B-202ENST00000460936 A8MU10 97 aa4.06□□□□□ -1.76
NIPSNAP3B-202ENST00000460936 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
NIPSNAP3B-202ENST00000460936 SVIPQ8NHG7 77 aa4.06□□□□□ -1.76
NIPSNAP3B-202ENST00000460936 A0A1B0GU69 56 aa4.05□□□□□ -1.76
NIPSNAP3B-202ENST00000460936 ATP5EP56381 51 aaPredicted RBP4.04□□□□□ -1.76
NIPSNAP3B-202ENST00000460936 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
NIPSNAP3B-202ENST00000460936 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
NIPSNAP3B-202ENST00000460936 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
NIPSNAP3B-202ENST00000460936 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
NIPSNAP3B-202ENST00000460936 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
NIPSNAP3B-202ENST00000460936 PRR15LQ9BU68 103 aa3.87□□□□□ -1.79
NIPSNAP3B-202ENST00000460936 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
NIPSNAP3B-202ENST00000460936 Q1T7F1 81 aa3.82□□□□□ -1.8
NIPSNAP3B-202ENST00000460936 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
NIPSNAP3B-202ENST00000460936 PRO0628Q9UI54 55 aa3.78□□□□□ -1.8
NIPSNAP3B-202ENST00000460936 V9GYY9 64 aa3.78□□□□□ -1.8
NIPSNAP3B-202ENST00000460936 KRTAP25-1Q3LHN0 102 aa3.77□□□□□ -1.81
NIPSNAP3B-202ENST00000460936 LINC01558Q9Y6Z2 57 aa3.75□□□□□ -1.81
NIPSNAP3B-202ENST00000460936 UQCR11O14957 56 aa3.73□□□□□ -1.81
NIPSNAP3B-202ENST00000460936 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
NIPSNAP3B-202ENST00000460936 PSPHP1O15172 72 aa3.69□□□□□ -1.82
NIPSNAP3B-202ENST00000460936 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
NIPSNAP3B-202ENST00000460936 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
NIPSNAP3B-202ENST00000460936 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
NIPSNAP3B-202ENST00000460936 MT1AP04731 61 aa3.62□□□□□ -1.83
NIPSNAP3B-202ENST00000460936 K7ERS5 55 aa3.61□□□□□ -1.83
NIPSNAP3B-202ENST00000460936 MIR22HGQ0VDD5 57 aa3.61□□□□□ -1.83
NIPSNAP3B-202ENST00000460936 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
NIPSNAP3B-202ENST00000460936 CDC42SE1Q9NRR8 79 aa3.6□□□□□ -1.83
NIPSNAP3B-202ENST00000460936 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
NIPSNAP3B-202ENST00000460936 A6NED7 52 aa3.58□□□□□ -1.84
NIPSNAP3B-202ENST00000460936 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
NIPSNAP3B-202ENST00000460936 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
NIPSNAP3B-202ENST00000460936 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
NIPSNAP3B-202ENST00000460936 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
NIPSNAP3B-202ENST00000460936 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
NIPSNAP3B-202ENST00000460936 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
NIPSNAP3B-202ENST00000460936 KTN1-AS1Q86SY8 53 aa3.48□□□□□ -1.85
NIPSNAP3B-202ENST00000460936 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
NIPSNAP3B-202ENST00000460936 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
NIPSNAP3B-202ENST00000460936 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
NIPSNAP3B-202ENST00000460936 MT3P25713 68 aa3.36□□□□□ -1.87
NIPSNAP3B-202ENST00000460936 ROMO1P60602 79 aa3.3□□□□□ -1.88
NIPSNAP3B-202ENST00000460936 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
NIPSNAP3B-202ENST00000460936 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
NIPSNAP3B-202ENST00000460936 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
NIPSNAP3B-202ENST00000460936 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
NIPSNAP3B-202ENST00000460936 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
NIPSNAP3B-202ENST00000460936 LUZP6Q538Z0 58 aa2.61□□□□□ -1.99
NIPSNAP3B-202ENST00000460936 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
NIPSNAP3B-202ENST00000460936 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
NIPSNAP3B-202ENST00000460936 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
NIPSNAP3B-202ENST00000460936 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
NIPSNAP3B-202ENST00000460936 INE1O15225 51 aa2.28□□□□□ -2.04
NIPSNAP3B-202ENST00000460936 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
NIPSNAP3B-202ENST00000460936 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
NIPSNAP3B-202ENST00000460936 PRM1P04553 51 aa1.67□□□□□ -2.14
NIPSNAP3B-202ENST00000460936 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 56.2 ms