RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SPRR2BP35325 72 aa5.3□□□□□ -1.56
HDLBP-229ENST00000460826 SPRR2AP35326 72 aa5.3□□□□□ -1.56
HDLBP-229ENST00000460826 TNP1P09430 55 aa5.28□□□□□ -1.56
HDLBP-229ENST00000460826 LCE1AQ5T7P2 110 aa5.28□□□□□ -1.56
HDLBP-229ENST00000460826 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
HDLBP-229ENST00000460826 K7ERS5 55 aa5.27□□□□□ -1.57
HDLBP-229ENST00000460826 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
HDLBP-229ENST00000460826 LCE4AQ5TA78 99 aa5.26□□□□□ -1.57
HDLBP-229ENST00000460826 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
HDLBP-229ENST00000460826 KRTAP19-5Q3LI72 72 aa5.2□□□□□ -1.58
HDLBP-229ENST00000460826 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
HDLBP-229ENST00000460826 MT1EP04732 61 aa5.19□□□□□ -1.58
HDLBP-229ENST00000460826 CDC42SE1Q9NRR8 79 aa5.18□□□□□ -1.58
HDLBP-229ENST00000460826 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
HDLBP-229ENST00000460826 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
HDLBP-229ENST00000460826 SPRR2DP22532 72 aa5.12□□□□□ -1.59
HDLBP-229ENST00000460826 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
HDLBP-229ENST00000460826 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
HDLBP-229ENST00000460826 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
HDLBP-229ENST00000460826 ROMO1P60602 79 aa5.01□□□□□ -1.61
HDLBP-229ENST00000460826 MT1LQ93083 61 aa5.01□□□□□ -1.61
HDLBP-229ENST00000460826 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
HDLBP-229ENST00000460826 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
HDLBP-229ENST00000460826 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
HDLBP-229ENST00000460826 MT1GP13640 62 aa4.97□□□□□ -1.61
HDLBP-229ENST00000460826 MT1MQ8N339 61 aa4.93□□□□□ -1.62
HDLBP-229ENST00000460826 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
HDLBP-229ENST00000460826 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
HDLBP-229ENST00000460826 DSTQ03001 7570 aaKnown RBP4.88□□□□□ -1.63
HDLBP-229ENST00000460826 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
HDLBP-229ENST00000460826 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
HDLBP-229ENST00000460826 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
HDLBP-229ENST00000460826 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
HDLBP-229ENST00000460826 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
HDLBP-229ENST00000460826 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
HDLBP-229ENST00000460826 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
HDLBP-229ENST00000460826 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
HDLBP-229ENST00000460826 MT4P47944 62 aa4.47□□□□□ -1.69
HDLBP-229ENST00000460826 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
HDLBP-229ENST00000460826 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
HDLBP-229ENST00000460826 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
HDLBP-229ENST00000460826 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
HDLBP-229ENST00000460826 MT1AP04731 61 aa4.26□□□□□ -1.73
HDLBP-229ENST00000460826 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
HDLBP-229ENST00000460826 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
HDLBP-229ENST00000460826 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
HDLBP-229ENST00000460826 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
HDLBP-229ENST00000460826 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
HDLBP-229ENST00000460826 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
HDLBP-229ENST00000460826 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
HDLBP-229ENST00000460826 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
HDLBP-229ENST00000460826 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
HDLBP-229ENST00000460826 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
HDLBP-229ENST00000460826 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
HDLBP-229ENST00000460826 MT3P25713 68 aa3.86□□□□□ -1.79
HDLBP-229ENST00000460826 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
HDLBP-229ENST00000460826 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
HDLBP-229ENST00000460826 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
HDLBP-229ENST00000460826 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
HDLBP-229ENST00000460826 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
HDLBP-229ENST00000460826 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
HDLBP-229ENST00000460826 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
HDLBP-229ENST00000460826 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
HDLBP-229ENST00000460826 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
HDLBP-229ENST00000460826 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
HDLBP-229ENST00000460826 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
HDLBP-229ENST00000460826 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
HDLBP-229ENST00000460826 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
HDLBP-229ENST00000460826 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
HDLBP-229ENST00000460826 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
HDLBP-229ENST00000460826 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
HDLBP-229ENST00000460826 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
HDLBP-229ENST00000460826 PRM1P04553 51 aa2.6□□□□□ -1.99
HDLBP-229ENST00000460826 INE1O15225 51 aa2.58□□□□□ -2
HDLBP-229ENST00000460826 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
HDLBP-229ENST00000460826 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
HDLBP-229ENST00000460826 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
HDLBP-229ENST00000460826 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 83.4 ms