RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 DYNC1H1Q14204 4646 aaKnown RBP0.76□□□□□ -2.29
CCDC50-203ENST00000460064 M0QZ58 72 aa0.76□□□□□ -2.29
CCDC50-203ENST00000460064 PKD1P98161 4303 aa0.76□□□□□ -2.29
CCDC50-203ENST00000460064 DNAH2Q9P225 4427 aa0.75□□□□□ -2.29
CCDC50-203ENST00000460064 MT1HL1P0DM35 61 aa0.75□□□□□ -2.29
CCDC50-203ENST00000460064 FAT1Q14517 4588 aa0.74□□□□□ -2.29
CCDC50-203ENST00000460064 DNAH6Q9C0G6 4158 aa0.74□□□□□ -2.29
CCDC50-203ENST00000460064 PRCDQ00LT1 54 aa0.74□□□□□ -2.29
CCDC50-203ENST00000460064 DEFB136Q30KP8 78 aa0.74□□□□□ -2.29
CCDC50-203ENST00000460064 PKHD1L1Q86WI1 4243 aa0.73□□□□□ -2.29
CCDC50-203ENST00000460064 DNAH5Q8TE73 4624 aa0.73□□□□□ -2.29
CCDC50-203ENST00000460064 LRP1BQ9NZR2 4599 aa0.73□□□□□ -2.29
CCDC50-203ENST00000460064 SSPOA2VEC9 5147 aa0.73□□□□□ -2.29
CCDC50-203ENST00000460064 C9orf92A6NGG3 77 aa0.72□□□□□ -2.29
CCDC50-203ENST00000460064 DNAH17Q9UFH2 4485 aa0.72□□□□□ -2.29
CCDC50-203ENST00000460064 MACF1Q9UPN3 7388 aaKnown RBP0.71□□□□□ -2.3
CCDC50-203ENST00000460064 H3BNG1 76 aa0.71□□□□□ -2.3
CCDC50-203ENST00000460064 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
CCDC50-203ENST00000460064 LRP1Q07954 4544 aaKnown RBP0.71□□□□□ -2.3
CCDC50-203ENST00000460064 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
CCDC50-203ENST00000460064 FAT3Q8TDW7 4589 aa0.69□□□□□ -2.3
CCDC50-203ENST00000460064 DEFB4AO15263 64 aa0.69□□□□□ -2.3
CCDC50-203ENST00000460064 TNP1P09430 55 aa0.69□□□□□ -2.3
CCDC50-203ENST00000460064 LPAP08519 4548 aa0.68□□□□□ -2.3
CCDC50-203ENST00000460064 DNAH8Q96JB1 4490 aa0.67□□□□□ -2.3
CCDC50-203ENST00000460064 SYNE1Q8NF91 8797 aaKnown RBP0.66□□□□□ -2.3
CCDC50-203ENST00000460064 NEBP20929 6669 aa0.66□□□□□ -2.3
CCDC50-203ENST00000460064 HTN3P15516 51 aa0.66□□□□□ -2.3
CCDC50-203ENST00000460064 MT1HP80294 61 aa0.66□□□□□ -2.3
CCDC50-203ENST00000460064 GPR98Q8WXG9 6306 aa0.66□□□□□ -2.3
CCDC50-203ENST00000460064 SYNE2Q8WXH0 6885 aaKnown RBP0.65□□□□□ -2.3
CCDC50-203ENST00000460064 SPART-AS1P0CW21 52 aa0.65□□□□□ -2.31
CCDC50-203ENST00000460064 KRTAP19-6Q3LI70 58 aa0.65□□□□□ -2.31
CCDC50-203ENST00000460064 K7EIM0 57 aa0.64□□□□□ -2.31
CCDC50-203ENST00000460064 SPRR2DP22532 72 aa0.64□□□□□ -2.31
CCDC50-203ENST00000460064 SPRR2EP22531 72 aa0.63□□□□□ -2.31
CCDC50-203ENST00000460064 SPRR2BP35325 72 aa0.63□□□□□ -2.31
CCDC50-203ENST00000460064 SPRR2AP35326 72 aa0.63□□□□□ -2.31
CCDC50-203ENST00000460064 USH2AO75445 5202 aa0.63□□□□□ -2.31
CCDC50-203ENST00000460064 KMT2DO14686 5537 aa0.62□□□□□ -2.31
CCDC50-203ENST00000460064 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
CCDC50-203ENST00000460064 MUC12Q9UKN1 5478 aa0.59□□□□□ -2.31
CCDC50-203ENST00000460064 KRTAP19-2Q3LHN2 52 aa0.59□□□□□ -2.31
CCDC50-203ENST00000460064 TMEM167AQ8TBQ9 72 aa0.59□□□□□ -2.31
CCDC50-203ENST00000460064 MUC17Q685J3 4493 aa0.59□□□□□ -2.32
CCDC50-203ENST00000460064 SPRR2FQ96RM1 72 aa0.58□□□□□ -2.32
CCDC50-203ENST00000460064 DSTQ03001 7570 aaKnown RBP0.57□□□□□ -2.32
CCDC50-203ENST00000460064 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
CCDC50-203ENST00000460064 A0A096LPF7 62 aa0.56□□□□□ -2.32
CCDC50-203ENST00000460064 APELAP0DMC3 54 aa0.56□□□□□ -2.32
CCDC50-203ENST00000460064 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
CCDC50-203ENST00000460064 KRTAP8-1Q8IUC2 63 aa0.56□□□□□ -2.32
CCDC50-203ENST00000460064 MT2AP02795 61 aa0.55□□□□□ -2.32
CCDC50-203ENST00000460064 MT4P47944 62 aa0.55□□□□□ -2.32
CCDC50-203ENST00000460064 RHPN1-AS1Q9BWJ2 59 aa0.55□□□□□ -2.32
CCDC50-203ENST00000460064 MT1FP04733 61 aa0.54□□□□□ -2.32
CCDC50-203ENST00000460064 LINC01556Q5JQF7 62 aa0.54□□□□□ -2.32
CCDC50-203ENST00000460064 FLGP20930 4061 aaPredicted RBP0.54□□□□□ -2.32
CCDC50-203ENST00000460064 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
CCDC50-203ENST00000460064 HTN1P15515 57 aa0.53□□□□□ -2.32
CCDC50-203ENST00000460064 RPL39P5Q59GN2 51 aa0.53□□□□□ -2.32
CCDC50-203ENST00000460064 MT1AP04731 61 aa0.52□□□□□ -2.33
CCDC50-203ENST00000460064 KRTAP19-5Q3LI72 72 aa0.49□□□□□ -2.33
CCDC50-203ENST00000460064 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
CCDC50-203ENST00000460064 A0A096LNI7 61 aa0.48□□□□□ -2.33
CCDC50-203ENST00000460064 DEFB1P60022 68 aa0.48□□□□□ -2.33
CCDC50-203ENST00000460064 KRTAP20-2Q3LI61 65 aa0.44□□□□□ -2.34
CCDC50-203ENST00000460064 MT1BP07438 61 aa0.43□□□□□ -2.34
CCDC50-203ENST00000460064 RPS29P62273 56 aaKnown RBP0.43□□□□□ -2.34
CCDC50-203ENST00000460064 KRTAP19-8Q3LI54 63 aa0.4□□□□□ -2.35
CCDC50-203ENST00000460064 MT1GP13640 62 aa0.37□□□□□ -2.35
CCDC50-203ENST00000460064 SPRR2GQ9BYE4 73 aa0.37□□□□□ -2.35
CCDC50-203ENST00000460064 MT1XP80297 61 aa0.35□□□□□ -2.35
CCDC50-203ENST00000460064 MT1EP04732 61 aa0.33□□□□□ -2.36
CCDC50-203ENST00000460064 MT1MQ8N339 61 aa0.33□□□□□ -2.36
CCDC50-203ENST00000460064 KRTAP19-7Q3SYF9 63 aa0.31□□□□□ -2.36
CCDC50-203ENST00000460064 MT1LQ93083 61 aa0.28□□□□□ -2.36
CCDC50-203ENST00000460064 KRTAP6-1Q3LI64 71 aa0.24□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 58.8 ms