RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	KRTAP5-10	Q6L8G5	202 aa		5.02	□□□□□ -1.61
SNHG17-208	ENST00000456953	MT4	P47944	62 aa		4.99	□□□□□ -1.61
SNHG17-208	ENST00000456953	KRTAP19-3	Q7Z4W3	81 aa		4.99	□□□□□ -1.61
SNHG17-208	ENST00000456953	CDC42SE1	Q9NRR8	79 aa		4.99	□□□□□ -1.61
SNHG17-208	ENST00000456953	LCE4A	Q5TA78	99 aa		4.98	□□□□□ -1.61
SNHG17-208	ENST00000456953	KRTAP19-7	Q3SYF9	63 aa		4.94	□□□□□ -1.62
SNHG17-208	ENST00000456953	MT1E	P04732	61 aa		4.92	□□□□□ -1.62
SNHG17-208	ENST00000456953	KRTAP5-7	Q6L8G8	165 aa		4.9	□□□□□ -1.63
SNHG17-208	ENST00000456953	BRK1	Q8WUW1	75 aa		4.89	□□□□□ -1.63
SNHG17-208	ENST00000456953	C10orf95	Q9H7T3	257 aa		4.88	□□□□□ -1.63
SNHG17-208	ENST00000456953	TNP1	P09430	55 aa		4.84	□□□□□ -1.63
SNHG17-208	ENST00000456953	MT1G	P13640	62 aa		4.82	□□□□□ -1.64
SNHG17-208	ENST00000456953	KRTAP5-4	Q6L8H1	288 aa		4.81	□□□□□ -1.64
SNHG17-208	ENST00000456953	PP632	Q6XCG6	107 aa		4.79	□□□□□ -1.64
SNHG17-208	ENST00000456953	KRTAP4-6	Q9BYQ5	205 aa		4.79	□□□□□ -1.64
SNHG17-208	ENST00000456953	KRTAP5-3	Q6L8H2	238 aa		4.78	□□□□□ -1.64
SNHG17-208	ENST00000456953	ROMO1	P60602	79 aa		4.75	□□□□□ -1.65
SNHG17-208	ENST00000456953	KRTAP25-1	Q3LHN0	102 aa		4.74	□□□□□ -1.65
SNHG17-208	ENST00000456953	MT1M	Q8N339	61 aa		4.72	□□□□□ -1.65
SNHG17-208	ENST00000456953	SPRR5	A0A1B0GTR4	108 aa		4.7	□□□□□ -1.66
SNHG17-208	ENST00000456953	KRTAP19-5	Q3LI72	72 aa		4.67	□□□□□ -1.66
SNHG17-208	ENST00000456953	LCE3A	Q5TA76	89 aa		4.65	□□□□□ -1.67
SNHG17-208	ENST00000456953	MT1L	Q93083	61 aa		4.62	□□□□□ -1.67
SNHG17-208	ENST00000456953	PMAIP1	Q13794	54 aa		4.61	□□□□□ -1.67
SNHG17-208	ENST00000456953	KRTAP4-3	Q9BYR4	195 aa		4.61	□□□□□ -1.67
SNHG17-208	ENST00000456953	PRO0628	Q9UI54	55 aa		4.6	□□□□□ -1.67
SNHG17-208	ENST00000456953	KRTAP20-2	Q3LI61	65 aa		4.56	□□□□□ -1.68
SNHG17-208	ENST00000456953	KRTAP23-1	A1A580	65 aa		4.55	□□□□□ -1.68
SNHG17-208	ENST00000456953	KRTAP12-3	P60328	96 aa		4.49	□□□□□ -1.69
SNHG17-208	ENST00000456953	AHNAK	Q09666	5890 aa	Known RBP	4.49	□□□□□ -1.69
SNHG17-208	ENST00000456953	KRTAP12-4	P60329	112 aa		4.41	□□□□□ -1.7
SNHG17-208	ENST00000456953	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.38	□□□□□ -1.71
SNHG17-208	ENST00000456953	MUC5AC	P98088	5654 aa		4.37	□□□□□ -1.71
SNHG17-208	ENST00000456953	KRTAP4-7	Q9BYR0	210 aa		4.34	□□□□□ -1.71
SNHG17-208	ENST00000456953	PRAC1	Q96KF2	57 aa		4.33	□□□□□ -1.72
SNHG17-208	ENST00000456953	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.33	□□□□□ -1.72
SNHG17-208	ENST00000456953	KRTAP15-1	Q3LI76	137 aa		4.32	□□□□□ -1.72
SNHG17-208	ENST00000456953	SYNE1	Q8NF91	8797 aa	Known RBP	4.31	□□□□□ -1.72
SNHG17-208	ENST00000456953	KTN1-AS1	Q86SY8	53 aa		4.3	□□□□□ -1.72
SNHG17-208	ENST00000456953	KRTAP4-11	Q9BYQ6	195 aa		4.3	□□□□□ -1.72
SNHG17-208	ENST00000456953	KRTAP19-4	Q3LI73	84 aa		4.23	□□□□□ -1.73
SNHG17-208	ENST00000456953	KRTAP5-8	O75690	187 aa		4.17	□□□□□ -1.74
SNHG17-208	ENST00000456953	LCE3C	Q5T5A8	94 aa		4.16	□□□□□ -1.74
SNHG17-208	ENST00000456953	LOC100996750	A0A140TA64	210 aa		4.14	□□□□□ -1.75
SNHG17-208	ENST00000456953	SVIP	Q8NHG7	77 aa		4.13	□□□□□ -1.75
SNHG17-208	ENST00000456953	KRTAP5-2	Q701N4	177 aa		4.12	□□□□□ -1.75
SNHG17-208	ENST00000456953	OBSCN	Q5VST9	7968 aa		4.08	□□□□□ -1.76
SNHG17-208	ENST00000456953	KRTAP9-9	Q9BYP9	154 aa		4.04	□□□□□ -1.76
SNHG17-208	ENST00000456953	MT1A	P04731	61 aa		3.92	□□□□□ -1.78
SNHG17-208	ENST00000456953	KRTAP6-1	Q3LI64	71 aa		3.92	□□□□□ -1.78
SNHG17-208	ENST00000456953	KRTAP9-6	A8MVA2	160 aa		3.88	□□□□□ -1.79
SNHG17-208	ENST00000456953	KRTAP6-2	Q3LI66	62 aa		3.86	□□□□□ -1.79
SNHG17-208	ENST00000456953	KRTAP9-4	Q9BYQ2	154 aa		3.84	□□□□□ -1.79
SNHG17-208	ENST00000456953	KRTAP5-1	Q6L8H4	278 aa		3.78	□□□□□ -1.8
SNHG17-208	ENST00000456953	LUZP6	Q538Z0	58 aa		3.65	□□□□□ -1.83
SNHG17-208	ENST00000456953	MT3	P25713	68 aa		3.62	□□□□□ -1.83
SNHG17-208	ENST00000456953	LCE1E	Q5T753	118 aa		3.46	□□□□□ -1.86
SNHG17-208	ENST00000456953	KRTAP4-2	Q9BYR5	136 aa		3.3	□□□□□ -1.88
SNHG17-208	ENST00000456953	NDUFAF8	A1L188	74 aa		3.29	□□□□□ -1.88
SNHG17-208	ENST00000456953	LCE1B	Q5T7P3	118 aa		3.27	□□□□□ -1.89
SNHG17-208	ENST00000456953	LCE1C	Q5T751	118 aa		3.2	□□□□□ -1.9
SNHG17-208	ENST00000456953	KRTAP4-12	Q9BQ66	201 aa		3.16	□□□□□ -1.9
SNHG17-208	ENST00000456953	LCE3D	Q9BYE3	92 aa		3.09	□□□□□ -1.91
SNHG17-208	ENST00000456953	KRTAP5-11	Q6L8G4	156 aa		3.04	□□□□□ -1.92
SNHG17-208	ENST00000456953	LCE1F	Q5T754	118 aa		3	□□□□□ -1.93
SNHG17-208	ENST00000456953	LCE3E	Q5T5B0	92 aa		2.97	□□□□□ -1.93
SNHG17-208	ENST00000456953	PHGR1	C9JFL3	82 aa		2.94	□□□□□ -1.94
SNHG17-208	ENST00000456953	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.86	□□□□□ -1.95
SNHG17-208	ENST00000456953		A0A0A0MQY5	61 aa		2.85	□□□□□ -1.95
SNHG17-208	ENST00000456953	INE1	O15225	51 aa		2.71	□□□□□ -1.98
SNHG17-208	ENST00000456953	KRTAP21-2	Q3LI59	83 aa		2.59	□□□□□ -1.99
SNHG17-208	ENST00000456953	MUC19	Q7Z5P9	8384 aa		2.54	□□□□□ -2
SNHG17-208	ENST00000456953	PRM1	P04553	51 aa		2.45	□□□□□ -2.02
SNHG17-208	ENST00000456953	KRTAP4-4	Q9BYR3	166 aa		2.44	□□□□□ -2.02
SNHG17-208	ENST00000456953		H3BS24	57 aa		2.35	□□□□□ -2.03
SNHG17-208	ENST00000456953	KRTAP21-1	Q3LI58	79 aa		2.26	□□□□□ -2.05
SNHG17-208	ENST00000456953	MUC16	Q8WXI7	14507 aa		1.72	□□□□□ -2.13

Retrieved 77 of 20,778 RNA–protein pairs in 107.3 ms