RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 PLAC4Q8WY50 150 aa2.83□□□□□ -1.96
CHEK2-220ENST00000454252 A0A0D9SG42 100 aa2.82□□□□□ -1.96
CHEK2-220ENST00000454252 DSTQ03001 7570 aaKnown RBP2.8□□□□□ -1.96
CHEK2-220ENST00000454252 UQCR11O14957 56 aa2.8□□□□□ -1.96
CHEK2-220ENST00000454252 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
CHEK2-220ENST00000454252 KRTAP10-12P60413 245 aa2.78□□□□□ -1.96
CHEK2-220ENST00000454252 MIR22HGQ0VDD5 57 aa2.77□□□□□ -1.97
CHEK2-220ENST00000454252 A6NED7 52 aa2.75□□□□□ -1.97
CHEK2-220ENST00000454252 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
CHEK2-220ENST00000454252 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
CHEK2-220ENST00000454252 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
CHEK2-220ENST00000454252 CAMK2N1Q7Z7J9 78 aa2.68□□□□□ -1.98
CHEK2-220ENST00000454252 KRTAP15-1Q3LI76 137 aa2.67□□□□□ -1.98
CHEK2-220ENST00000454252 C10orf95Q9H7T3 257 aa2.67□□□□□ -1.98
CHEK2-220ENST00000454252 MT4P47944 62 aa2.66□□□□□ -1.98
CHEK2-220ENST00000454252 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
CHEK2-220ENST00000454252 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
CHEK2-220ENST00000454252 MT1EP04732 61 aa2.64□□□□□ -1.99
CHEK2-220ENST00000454252 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
CHEK2-220ENST00000454252 SVIPQ8NHG7 77 aa2.62□□□□□ -1.99
CHEK2-220ENST00000454252 BRK1Q8WUW1 75 aa2.62□□□□□ -1.99
CHEK2-220ENST00000454252 K7ERS5 55 aa2.61□□□□□ -1.99
CHEK2-220ENST00000454252 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
CHEK2-220ENST00000454252 TNP1P09430 55 aa2.55□□□□□ -2
CHEK2-220ENST00000454252 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
CHEK2-220ENST00000454252 ROMO1P60602 79 aa2.54□□□□□ -2
CHEK2-220ENST00000454252 KRTAP19-5Q3LI72 72 aa2.54□□□□□ -2
CHEK2-220ENST00000454252 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
CHEK2-220ENST00000454252 KRTAP23-1A1A580 65 aa2.53□□□□□ -2
CHEK2-220ENST00000454252 MT1MQ8N339 61 aa2.52□□□□□ -2.01
CHEK2-220ENST00000454252 MT1GP13640 62 aa2.51□□□□□ -2.01
CHEK2-220ENST00000454252 KRTAP25-1Q3LHN0 102 aa2.51□□□□□ -2.01
CHEK2-220ENST00000454252 LCE3AQ5TA76 89 aa2.51□□□□□ -2.01
CHEK2-220ENST00000454252 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
CHEK2-220ENST00000454252 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
CHEK2-220ENST00000454252 PRO0628Q9UI54 55 aa2.49□□□□□ -2.01
CHEK2-220ENST00000454252 PMAIP1Q13794 54 aa2.48□□□□□ -2.01
CHEK2-220ENST00000454252 MT1LQ93083 61 aa2.48□□□□□ -2.01
CHEK2-220ENST00000454252 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
CHEK2-220ENST00000454252 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
CHEK2-220ENST00000454252 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
CHEK2-220ENST00000454252 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
CHEK2-220ENST00000454252 KRTAP12-3P60328 96 aa2.4□□□□□ -2.03
CHEK2-220ENST00000454252 PRAC1Q96KF2 57 aa2.39□□□□□ -2.03
CHEK2-220ENST00000454252 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
CHEK2-220ENST00000454252 KTN1-AS1Q86SY8 53 aa2.33□□□□□ -2.04
CHEK2-220ENST00000454252 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
CHEK2-220ENST00000454252 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
CHEK2-220ENST00000454252 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
CHEK2-220ENST00000454252 LCE3CQ5T5A8 94 aa2.24□□□□□ -2.05
CHEK2-220ENST00000454252 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
CHEK2-220ENST00000454252 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
CHEK2-220ENST00000454252 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
CHEK2-220ENST00000454252 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
CHEK2-220ENST00000454252 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
CHEK2-220ENST00000454252 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
CHEK2-220ENST00000454252 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
CHEK2-220ENST00000454252 KRTAP6-1Q3LI64 71 aa2.13□□□□□ -2.07
CHEK2-220ENST00000454252 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
CHEK2-220ENST00000454252 MT1AP04731 61 aa2.08□□□□□ -2.08
CHEK2-220ENST00000454252 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
CHEK2-220ENST00000454252 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
CHEK2-220ENST00000454252 MT3P25713 68 aa1.98□□□□□ -2.09
CHEK2-220ENST00000454252 LUZP6Q538Z0 58 aa1.87□□□□□ -2.11
CHEK2-220ENST00000454252 NDUFAF8A1L188 74 aa1.79□□□□□ -2.12
CHEK2-220ENST00000454252 LCE1FQ5T754 118 aa1.79□□□□□ -2.12
CHEK2-220ENST00000454252 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
CHEK2-220ENST00000454252 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
CHEK2-220ENST00000454252 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
CHEK2-220ENST00000454252 LCE3EQ5T5B0 92 aa1.58□□□□□ -2.16
CHEK2-220ENST00000454252 A0A0A0MQY5 61 aa1.56□□□□□ -2.16
CHEK2-220ENST00000454252 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
CHEK2-220ENST00000454252 INE1O15225 51 aa1.43□□□□□ -2.18
CHEK2-220ENST00000454252 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
CHEK2-220ENST00000454252 PRM1P04553 51 aa1.33□□□□□ -2.2
CHEK2-220ENST00000454252 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
CHEK2-220ENST00000454252 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
CHEK2-220ENST00000454252 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 163.5 ms