RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
VPS16-205ENST00000453689 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
VPS16-205ENST00000453689 KRTAP19-5Q3LI72 72 aa5.39□□□□□ -1.55
VPS16-205ENST00000453689 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
VPS16-205ENST00000453689 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
VPS16-205ENST00000453689 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
VPS16-205ENST00000453689 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
VPS16-205ENST00000453689 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
VPS16-205ENST00000453689 MT1GP13640 62 aa5.24□□□□□ -1.57
VPS16-205ENST00000453689 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
VPS16-205ENST00000453689 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
VPS16-205ENST00000453689 MT1LQ93083 61 aa5.21□□□□□ -1.58
VPS16-205ENST00000453689 PRO0628Q9UI54 55 aa5.2□□□□□ -1.58
VPS16-205ENST00000453689 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
VPS16-205ENST00000453689 MT1MQ8N339 61 aa5.17□□□□□ -1.58
VPS16-205ENST00000453689 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
VPS16-205ENST00000453689 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
VPS16-205ENST00000453689 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
VPS16-205ENST00000453689 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
VPS16-205ENST00000453689 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
VPS16-205ENST00000453689 PRAC1Q96KF2 57 aa4.94□□□□□ -1.62
VPS16-205ENST00000453689 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
VPS16-205ENST00000453689 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
VPS16-205ENST00000453689 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
VPS16-205ENST00000453689 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
VPS16-205ENST00000453689 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
VPS16-205ENST00000453689 MT4P47944 62 aa4.83□□□□□ -1.64
VPS16-205ENST00000453689 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
VPS16-205ENST00000453689 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
VPS16-205ENST00000453689 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
VPS16-205ENST00000453689 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
VPS16-205ENST00000453689 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
VPS16-205ENST00000453689 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
VPS16-205ENST00000453689 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
VPS16-205ENST00000453689 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
VPS16-205ENST00000453689 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
VPS16-205ENST00000453689 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
VPS16-205ENST00000453689 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
VPS16-205ENST00000453689 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
VPS16-205ENST00000453689 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
VPS16-205ENST00000453689 MT1AP04731 61 aa4.44□□□□□ -1.7
VPS16-205ENST00000453689 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
VPS16-205ENST00000453689 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
VPS16-205ENST00000453689 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
VPS16-205ENST00000453689 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
VPS16-205ENST00000453689 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
VPS16-205ENST00000453689 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
VPS16-205ENST00000453689 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
VPS16-205ENST00000453689 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
VPS16-205ENST00000453689 MT3P25713 68 aa4.05□□□□□ -1.76
VPS16-205ENST00000453689 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
VPS16-205ENST00000453689 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
VPS16-205ENST00000453689 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
VPS16-205ENST00000453689 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
VPS16-205ENST00000453689 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
VPS16-205ENST00000453689 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
VPS16-205ENST00000453689 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
VPS16-205ENST00000453689 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
VPS16-205ENST00000453689 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
VPS16-205ENST00000453689 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
VPS16-205ENST00000453689 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
VPS16-205ENST00000453689 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
VPS16-205ENST00000453689 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
VPS16-205ENST00000453689 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
VPS16-205ENST00000453689 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
VPS16-205ENST00000453689 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
VPS16-205ENST00000453689 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
VPS16-205ENST00000453689 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
VPS16-205ENST00000453689 INE1O15225 51 aa3.05□□□□□ -1.92
VPS16-205ENST00000453689 H3BS24 57 aa3.03□□□□□ -1.92
VPS16-205ENST00000453689 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
VPS16-205ENST00000453689 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
VPS16-205ENST00000453689 PRM1P04553 51 aa2.82□□□□□ -1.96
VPS16-205ENST00000453689 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
VPS16-205ENST00000453689 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
VPS16-205ENST00000453689 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
VPS16-205ENST00000453689 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
VPS16-205ENST00000453689 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms