RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 LCE1AQ5T7P2 110 aa7.44□□□□□ -1.22
HIGD1A-204ENST00000452906 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
HIGD1A-204ENST00000452906 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
HIGD1A-204ENST00000452906 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
HIGD1A-204ENST00000452906 KRTAP2-2Q9BYT5 123 aa7.33□□□□□ -1.24
HIGD1A-204ENST00000452906 KRTAP2-1Q9BYU5 128 aa7.33□□□□□ -1.24
HIGD1A-204ENST00000452906 SPRR2DP22532 72 aa7.31□□□□□ -1.24
HIGD1A-204ENST00000452906 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
HIGD1A-204ENST00000452906 KRTAP15-1Q3LI76 137 aa7.22□□□□□ -1.25
HIGD1A-204ENST00000452906 KRTAP19-7Q3SYF9 63 aa7.19□□□□□ -1.26
HIGD1A-204ENST00000452906 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
HIGD1A-204ENST00000452906 KRTAP19-4Q3LI73 84 aa7.12□□□□□ -1.27
HIGD1A-204ENST00000452906 MT1EP04732 61 aa7.1□□□□□ -1.27
HIGD1A-204ENST00000452906 MT1LQ93083 61 aa6.96□□□□□ -1.3
HIGD1A-204ENST00000452906 KRTAP19-3Q7Z4W3 81 aa6.88□□□□□ -1.31
HIGD1A-204ENST00000452906 LCE3CQ5T5A8 94 aa6.87□□□□□ -1.31
HIGD1A-204ENST00000452906 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
HIGD1A-204ENST00000452906 MT1GP13640 62 aa6.84□□□□□ -1.31
HIGD1A-204ENST00000452906 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
HIGD1A-204ENST00000452906 DSTQ03001 7570 aaKnown RBP6.78□□□□□ -1.32
HIGD1A-204ENST00000452906 LUZP6Q538Z0 58 aa6.71□□□□□ -1.34
HIGD1A-204ENST00000452906 MT1MQ8N339 61 aa6.7□□□□□ -1.34
HIGD1A-204ENST00000452906 GPR98Q8WXG9 6306 aa6.69□□□□□ -1.34
HIGD1A-204ENST00000452906 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
HIGD1A-204ENST00000452906 KRTAP4-7Q9BYR0 210 aa6.59□□□□□ -1.35
HIGD1A-204ENST00000452906 LCE4AQ5TA78 99 aa6.49□□□□□ -1.37
HIGD1A-204ENST00000452906 LCE1DQ5T752 114 aa6.48□□□□□ -1.37
HIGD1A-204ENST00000452906 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
HIGD1A-204ENST00000452906 HMCN1Q96RW7 5635 aa6.4□□□□□ -1.38
HIGD1A-204ENST00000452906 H3BS24 57 aa6.4□□□□□ -1.38
HIGD1A-204ENST00000452906 MT4P47944 62 aa6.37□□□□□ -1.39
HIGD1A-204ENST00000452906 KRTAP9-6A8MVA2 160 aa6.36□□□□□ -1.39
HIGD1A-204ENST00000452906 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
HIGD1A-204ENST00000452906 KRTAP5-4Q6L8H1 288 aa6.33□□□□□ -1.4
HIGD1A-204ENST00000452906 AHNAK2Q8IVF2 5795 aa6.23□□□□□ -1.41
HIGD1A-204ENST00000452906 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
HIGD1A-204ENST00000452906 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
HIGD1A-204ENST00000452906 KRTAP5-10Q6L8G5 202 aa6.12□□□□□ -1.43
HIGD1A-204ENST00000452906 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
HIGD1A-204ENST00000452906 MT1AP04731 61 aa5.96□□□□□ -1.46
HIGD1A-204ENST00000452906 KRTAP20-2Q3LI61 65 aa5.96□□□□□ -1.46
HIGD1A-204ENST00000452906 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
HIGD1A-204ENST00000452906 KRTAP5-7Q6L8G8 165 aa5.92□□□□□ -1.46
HIGD1A-204ENST00000452906 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
HIGD1A-204ENST00000452906 KRTAP6-1Q3LI64 71 aa5.82□□□□□ -1.48
HIGD1A-204ENST00000452906 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
HIGD1A-204ENST00000452906 A0A0A0MQY5 61 aa5.72□□□□□ -1.49
HIGD1A-204ENST00000452906 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.5
HIGD1A-204ENST00000452906 KRTAP5-2Q701N4 177 aa5.52□□□□□ -1.53
HIGD1A-204ENST00000452906 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
HIGD1A-204ENST00000452906 MT3P25713 68 aa5.44□□□□□ -1.54
HIGD1A-204ENST00000452906 INE1O15225 51 aa5.39□□□□□ -1.55
HIGD1A-204ENST00000452906 KRTAP6-2Q3LI66 62 aa5.38□□□□□ -1.55
HIGD1A-204ENST00000452906 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
HIGD1A-204ENST00000452906 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
HIGD1A-204ENST00000452906 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
HIGD1A-204ENST00000452906 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
HIGD1A-204ENST00000452906 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
HIGD1A-204ENST00000452906 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
HIGD1A-204ENST00000452906 MUC5BQ9HC84 5762 aaPredicted RBP5.16□□□□□ -1.58
HIGD1A-204ENST00000452906 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
HIGD1A-204ENST00000452906 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
HIGD1A-204ENST00000452906 KRTAP5-1Q6L8H4 278 aa4.96□□□□□ -1.62
HIGD1A-204ENST00000452906 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
HIGD1A-204ENST00000452906 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
HIGD1A-204ENST00000452906 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
HIGD1A-204ENST00000452906 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
HIGD1A-204ENST00000452906 PRM1P04553 51 aa4.3□□□□□ -1.72
HIGD1A-204ENST00000452906 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
HIGD1A-204ENST00000452906 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
HIGD1A-204ENST00000452906 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
HIGD1A-204ENST00000452906 KRTAP21-2Q3LI59 83 aa3.81□□□□□ -1.8
HIGD1A-204ENST00000452906 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
HIGD1A-204ENST00000452906 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
HIGD1A-204ENST00000452906 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
HIGD1A-204ENST00000452906 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
HIGD1A-204ENST00000452906 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 63.3 ms