RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 SPRR2EP22531 72 aa5.32□□□□□ -1.56
SHANK2-210ENST00000449116 SPRR2BP35325 72 aa5.32□□□□□ -1.56
SHANK2-210ENST00000449116 SPRR2AP35326 72 aa5.32□□□□□ -1.56
SHANK2-210ENST00000449116 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
SHANK2-210ENST00000449116 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
SHANK2-210ENST00000449116 MT1LQ93083 61 aa5.23□□□□□ -1.57
SHANK2-210ENST00000449116 GPR98Q8WXG9 6306 aa5.23□□□□□ -1.57
SHANK2-210ENST00000449116 PRAC1Q96KF2 57 aa5.21□□□□□ -1.58
SHANK2-210ENST00000449116 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
SHANK2-210ENST00000449116 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
SHANK2-210ENST00000449116 LCE5AQ5TCM9 118 aa5.2□□□□□ -1.58
SHANK2-210ENST00000449116 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
SHANK2-210ENST00000449116 MT1GP13640 62 aa5.18□□□□□ -1.58
SHANK2-210ENST00000449116 SVIPQ8NHG7 77 aa5.18□□□□□ -1.58
SHANK2-210ENST00000449116 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
SHANK2-210ENST00000449116 SPRR2DP22532 72 aa5.14□□□□□ -1.59
SHANK2-210ENST00000449116 MT1MQ8N339 61 aa5.1□□□□□ -1.59
SHANK2-210ENST00000449116 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
SHANK2-210ENST00000449116 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
SHANK2-210ENST00000449116 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
SHANK2-210ENST00000449116 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
SHANK2-210ENST00000449116 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
SHANK2-210ENST00000449116 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
SHANK2-210ENST00000449116 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
SHANK2-210ENST00000449116 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
SHANK2-210ENST00000449116 KRTAP9-6A8MVA2 160 aa4.68□□□□□ -1.66
SHANK2-210ENST00000449116 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
SHANK2-210ENST00000449116 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
SHANK2-210ENST00000449116 HMCN1Q96RW7 5635 aa4.62□□□□□ -1.67
SHANK2-210ENST00000449116 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
SHANK2-210ENST00000449116 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
SHANK2-210ENST00000449116 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
SHANK2-210ENST00000449116 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
SHANK2-210ENST00000449116 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
SHANK2-210ENST00000449116 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
SHANK2-210ENST00000449116 MT1AP04731 61 aa4.46□□□□□ -1.7
SHANK2-210ENST00000449116 MT4P47944 62 aa4.46□□□□□ -1.7
SHANK2-210ENST00000449116 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.71
SHANK2-210ENST00000449116 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
SHANK2-210ENST00000449116 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
SHANK2-210ENST00000449116 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
SHANK2-210ENST00000449116 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
SHANK2-210ENST00000449116 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
SHANK2-210ENST00000449116 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
SHANK2-210ENST00000449116 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
SHANK2-210ENST00000449116 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
SHANK2-210ENST00000449116 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
SHANK2-210ENST00000449116 MT3P25713 68 aa4.06□□□□□ -1.76
SHANK2-210ENST00000449116 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
SHANK2-210ENST00000449116 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
SHANK2-210ENST00000449116 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
SHANK2-210ENST00000449116 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
SHANK2-210ENST00000449116 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
SHANK2-210ENST00000449116 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
SHANK2-210ENST00000449116 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
SHANK2-210ENST00000449116 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
SHANK2-210ENST00000449116 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
SHANK2-210ENST00000449116 H3BS24 57 aa3.64□□□□□ -1.83
SHANK2-210ENST00000449116 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
SHANK2-210ENST00000449116 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
SHANK2-210ENST00000449116 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
SHANK2-210ENST00000449116 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
SHANK2-210ENST00000449116 INE1O15225 51 aa3.38□□□□□ -1.87
SHANK2-210ENST00000449116 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
SHANK2-210ENST00000449116 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
SHANK2-210ENST00000449116 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
SHANK2-210ENST00000449116 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
SHANK2-210ENST00000449116 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
SHANK2-210ENST00000449116 PRM1P04553 51 aa2.94□□□□□ -1.94
SHANK2-210ENST00000449116 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
SHANK2-210ENST00000449116 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
SHANK2-210ENST00000449116 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
SHANK2-210ENST00000449116 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
SHANK2-210ENST00000449116 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
SHANK2-210ENST00000449116 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
SHANK2-210ENST00000449116 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
SHANK2-210ENST00000449116 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 85.8 ms