RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
RCL1-208ENST00000448872 TNP1P09430 55 aa4.56□□□□□ -1.68
RCL1-208ENST00000448872 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
RCL1-208ENST00000448872 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
RCL1-208ENST00000448872 SPRR2FQ96RM1 72 aa4.53□□□□□ -1.68
RCL1-208ENST00000448872 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
RCL1-208ENST00000448872 MDN1Q9NU22 5596 aa4.49□□□□□ -1.69
RCL1-208ENST00000448872 LCE3AQ5TA76 89 aa4.49□□□□□ -1.69
RCL1-208ENST00000448872 NEBP20929 6669 aa4.47□□□□□ -1.69
RCL1-208ENST00000448872 ROMO1P60602 79 aa4.45□□□□□ -1.7
RCL1-208ENST00000448872 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
RCL1-208ENST00000448872 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
RCL1-208ENST00000448872 KRTAP19-7Q3SYF9 63 aa4.44□□□□□ -1.7
RCL1-208ENST00000448872 KRTAP19-5Q3LI72 72 aa4.43□□□□□ -1.7
RCL1-208ENST00000448872 MT1EP04732 61 aa4.38□□□□□ -1.71
RCL1-208ENST00000448872 SPRR2EP22531 72 aa4.38□□□□□ -1.71
RCL1-208ENST00000448872 SPRR2BP35325 72 aa4.38□□□□□ -1.71
RCL1-208ENST00000448872 SPRR2AP35326 72 aa4.38□□□□□ -1.71
RCL1-208ENST00000448872 MT3P25713 68 aa4.36□□□□□ -1.71
RCL1-208ENST00000448872 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
RCL1-208ENST00000448872 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
RCL1-208ENST00000448872 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
RCL1-208ENST00000448872 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
RCL1-208ENST00000448872 MT1LQ93083 61 aa4.24□□□□□ -1.73
RCL1-208ENST00000448872 SPRR2DP22532 72 aa4.23□□□□□ -1.73
RCL1-208ENST00000448872 PRO0628Q9UI54 55 aa4.21□□□□□ -1.74
RCL1-208ENST00000448872 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
RCL1-208ENST00000448872 MT1GP13640 62 aa4.18□□□□□ -1.74
RCL1-208ENST00000448872 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
RCL1-208ENST00000448872 MT1MQ8N339 61 aa4.14□□□□□ -1.75
RCL1-208ENST00000448872 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
RCL1-208ENST00000448872 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
RCL1-208ENST00000448872 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
RCL1-208ENST00000448872 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
RCL1-208ENST00000448872 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
RCL1-208ENST00000448872 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
RCL1-208ENST00000448872 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
RCL1-208ENST00000448872 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
RCL1-208ENST00000448872 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
RCL1-208ENST00000448872 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
RCL1-208ENST00000448872 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
RCL1-208ENST00000448872 MT4P47944 62 aa3.7□□□□□ -1.82
RCL1-208ENST00000448872 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
RCL1-208ENST00000448872 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
RCL1-208ENST00000448872 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
RCL1-208ENST00000448872 MT1AP04731 61 aa3.6□□□□□ -1.83
RCL1-208ENST00000448872 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.84
RCL1-208ENST00000448872 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
RCL1-208ENST00000448872 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
RCL1-208ENST00000448872 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
RCL1-208ENST00000448872 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
RCL1-208ENST00000448872 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
RCL1-208ENST00000448872 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
RCL1-208ENST00000448872 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
RCL1-208ENST00000448872 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
RCL1-208ENST00000448872 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
RCL1-208ENST00000448872 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.88
RCL1-208ENST00000448872 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
RCL1-208ENST00000448872 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
RCL1-208ENST00000448872 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
RCL1-208ENST00000448872 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
RCL1-208ENST00000448872 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
RCL1-208ENST00000448872 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
RCL1-208ENST00000448872 KRTAP5-8O75690 187 aa3.03□□□□□ -1.93
RCL1-208ENST00000448872 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
RCL1-208ENST00000448872 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
RCL1-208ENST00000448872 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
RCL1-208ENST00000448872 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
RCL1-208ENST00000448872 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
RCL1-208ENST00000448872 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
RCL1-208ENST00000448872 INE1O15225 51 aa2.58□□□□□ -2
RCL1-208ENST00000448872 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
RCL1-208ENST00000448872 PRM1P04553 51 aa2.33□□□□□ -2.04
RCL1-208ENST00000448872 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
RCL1-208ENST00000448872 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
RCL1-208ENST00000448872 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
RCL1-208ENST00000448872 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms