RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 KRTAP12-2P59991 146 aa5.32□□□□□ -1.56
ERGIC3-209ENST00000447986 K7ERS5 55 aa5.3□□□□□ -1.56
ERGIC3-209ENST00000447986 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
ERGIC3-209ENST00000447986 MT3P25713 68 aa5.29□□□□□ -1.56
ERGIC3-209ENST00000447986 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
ERGIC3-209ENST00000447986 KRTAP10-12P60413 245 aa5.21□□□□□ -1.58
ERGIC3-209ENST00000447986 KRTAP5-9P26371 169 aa5.2□□□□□ -1.58
ERGIC3-209ENST00000447986 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
ERGIC3-209ENST00000447986 SPRR2FQ96RM1 72 aa5.12□□□□□ -1.59
ERGIC3-209ENST00000447986 KMT2DO14686 5537 aa5.11□□□□□ -1.59
ERGIC3-209ENST00000447986 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
ERGIC3-209ENST00000447986 TNP1P09430 55 aa5.04□□□□□ -1.6
ERGIC3-209ENST00000447986 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
ERGIC3-209ENST00000447986 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
ERGIC3-209ENST00000447986 NEBP20929 6669 aa4.99□□□□□ -1.61
ERGIC3-209ENST00000447986 SPRR2EP22531 72 aa4.99□□□□□ -1.61
ERGIC3-209ENST00000447986 SPRR2BP35325 72 aa4.99□□□□□ -1.61
ERGIC3-209ENST00000447986 SPRR2AP35326 72 aa4.99□□□□□ -1.61
ERGIC3-209ENST00000447986 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
ERGIC3-209ENST00000447986 LUZP6Q538Z0 58 aa4.94□□□□□ -1.62
ERGIC3-209ENST00000447986 MDN1Q9NU22 5596 aa4.92□□□□□ -1.62
ERGIC3-209ENST00000447986 KRTAP19-7Q3SYF9 63 aa4.87□□□□□ -1.63
ERGIC3-209ENST00000447986 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
ERGIC3-209ENST00000447986 KRTAP20-1Q3LI63 56 aa4.84□□□□□ -1.63
ERGIC3-209ENST00000447986 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
ERGIC3-209ENST00000447986 MT1EP04732 61 aa4.83□□□□□ -1.64
ERGIC3-209ENST00000447986 SPRR2DP22532 72 aa4.83□□□□□ -1.64
ERGIC3-209ENST00000447986 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
ERGIC3-209ENST00000447986 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
ERGIC3-209ENST00000447986 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
ERGIC3-209ENST00000447986 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
ERGIC3-209ENST00000447986 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
ERGIC3-209ENST00000447986 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
ERGIC3-209ENST00000447986 MT1GP13640 62 aa4.69□□□□□ -1.66
ERGIC3-209ENST00000447986 MT1LQ93083 61 aa4.66□□□□□ -1.66
ERGIC3-209ENST00000447986 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.66
ERGIC3-209ENST00000447986 MT1MQ8N339 61 aa4.58□□□□□ -1.68
ERGIC3-209ENST00000447986 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
ERGIC3-209ENST00000447986 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
ERGIC3-209ENST00000447986 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
ERGIC3-209ENST00000447986 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
ERGIC3-209ENST00000447986 INE1O15225 51 aa4.31□□□□□ -1.72
ERGIC3-209ENST00000447986 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.73
ERGIC3-209ENST00000447986 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
ERGIC3-209ENST00000447986 MT4P47944 62 aa4.19□□□□□ -1.74
ERGIC3-209ENST00000447986 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
ERGIC3-209ENST00000447986 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
ERGIC3-209ENST00000447986 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
ERGIC3-209ENST00000447986 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
ERGIC3-209ENST00000447986 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
ERGIC3-209ENST00000447986 MT1AP04731 61 aa3.99□□□□□ -1.77
ERGIC3-209ENST00000447986 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
ERGIC3-209ENST00000447986 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
ERGIC3-209ENST00000447986 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
ERGIC3-209ENST00000447986 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
ERGIC3-209ENST00000447986 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
ERGIC3-209ENST00000447986 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
ERGIC3-209ENST00000447986 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
ERGIC3-209ENST00000447986 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
ERGIC3-209ENST00000447986 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
ERGIC3-209ENST00000447986 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
ERGIC3-209ENST00000447986 KRTAP5-7Q6L8G8 165 aa3.58□□□□□ -1.84
ERGIC3-209ENST00000447986 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
ERGIC3-209ENST00000447986 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
ERGIC3-209ENST00000447986 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
ERGIC3-209ENST00000447986 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
ERGIC3-209ENST00000447986 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
ERGIC3-209ENST00000447986 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
ERGIC3-209ENST00000447986 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
ERGIC3-209ENST00000447986 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
ERGIC3-209ENST00000447986 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
ERGIC3-209ENST00000447986 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.94
ERGIC3-209ENST00000447986 PRM1P04553 51 aa2.74□□□□□ -1.97
ERGIC3-209ENST00000447986 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
ERGIC3-209ENST00000447986 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
ERGIC3-209ENST00000447986 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
ERGIC3-209ENST00000447986 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
ERGIC3-209ENST00000447986 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 283 ms