RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 H0YAA0 97 aa2.93□□□□□ -1.94
PTPN3-205ENST00000447271 MT3P25713 68 aa2.93□□□□□ -1.94
PTPN3-205ENST00000447271 A8MU10 97 aa2.92□□□□□ -1.94
PTPN3-205ENST00000447271 ROMO1P60602 79 aa2.89□□□□□ -1.95
PTPN3-205ENST00000447271 LINC01554Q52M75 96 aa2.89□□□□□ -1.95
PTPN3-205ENST00000447271 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
PTPN3-205ENST00000447271 CRIPTQ9P021 101 aa2.89□□□□□ -1.95
PTPN3-205ENST00000447271 SPRR2DP22532 72 aa2.88□□□□□ -1.95
PTPN3-205ENST00000447271 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
PTPN3-205ENST00000447271 ADM2Q7Z4H4 148 aa2.87□□□□□ -1.95
PTPN3-205ENST00000447271 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
PTPN3-205ENST00000447271 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
PTPN3-205ENST00000447271 R4GN34 69 aa2.85□□□□□ -1.95
PTPN3-205ENST00000447271 KRTAP25-1Q3LHN0 102 aa2.83□□□□□ -1.96
PTPN3-205ENST00000447271 KRTAP10-12P60413 245 aa2.82□□□□□ -1.96
PTPN3-205ENST00000447271 A0A0D9SG42 100 aa2.81□□□□□ -1.96
PTPN3-205ENST00000447271 SPINT4Q6UDR6 99 aa2.81□□□□□ -1.96
PTPN3-205ENST00000447271 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
PTPN3-205ENST00000447271 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
PTPN3-205ENST00000447271 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
PTPN3-205ENST00000447271 MT2AP02795 61 aa2.78□□□□□ -1.96
PTPN3-205ENST00000447271 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
PTPN3-205ENST00000447271 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
PTPN3-205ENST00000447271 MT1FP04733 61 aa2.76□□□□□ -1.97
PTPN3-205ENST00000447271 P0C880 135 aa2.76□□□□□ -1.97
PTPN3-205ENST00000447271 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
PTPN3-205ENST00000447271 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
PTPN3-205ENST00000447271 PP632Q6XCG6 107 aa2.74□□□□□ -1.97
PTPN3-205ENST00000447271 CAMK2N1Q7Z7J9 78 aa2.72□□□□□ -1.97
PTPN3-205ENST00000447271 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
PTPN3-205ENST00000447271 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
PTPN3-205ENST00000447271 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
PTPN3-205ENST00000447271 KRTAP13-4Q3LI77 160 aa2.69□□□□□ -1.98
PTPN3-205ENST00000447271 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
PTPN3-205ENST00000447271 PLAC4Q8WY50 150 aa2.67□□□□□ -1.98
PTPN3-205ENST00000447271 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
PTPN3-205ENST00000447271 TNP1P09430 55 aa2.63□□□□□ -1.99
PTPN3-205ENST00000447271 MT4P47944 62 aa2.62□□□□□ -1.99
PTPN3-205ENST00000447271 LUZP6Q538Z0 58 aa2.6□□□□□ -1.99
PTPN3-205ENST00000447271 C10orf95Q9H7T3 257 aa2.53□□□□□ -2
PTPN3-205ENST00000447271 SPRR2GQ9BYE4 73 aa2.52□□□□□ -2.01
PTPN3-205ENST00000447271 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
PTPN3-205ENST00000447271 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
PTPN3-205ENST00000447271 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
PTPN3-205ENST00000447271 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
PTPN3-205ENST00000447271 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
PTPN3-205ENST00000447271 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
PTPN3-205ENST00000447271 KRTAP19-8Q3LI54 63 aa2.4□□□□□ -2.03
PTPN3-205ENST00000447271 LCE3AQ5TA76 89 aa2.36□□□□□ -2.03
PTPN3-205ENST00000447271 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
PTPN3-205ENST00000447271 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
PTPN3-205ENST00000447271 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
PTPN3-205ENST00000447271 MT1BP07438 61 aa2.25□□□□□ -2.05
PTPN3-205ENST00000447271 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
PTPN3-205ENST00000447271 MT1XP80297 61 aa2.23□□□□□ -2.05
PTPN3-205ENST00000447271 INE1O15225 51 aa2.19□□□□□ -2.06
PTPN3-205ENST00000447271 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
PTPN3-205ENST00000447271 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
PTPN3-205ENST00000447271 KRTAP19-5Q3LI72 72 aa2.09□□□□□ -2.07
PTPN3-205ENST00000447271 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
PTPN3-205ENST00000447271 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
PTPN3-205ENST00000447271 MT1GP13640 62 aa2□□□□□ -2.09
PTPN3-205ENST00000447271 MT1EP04732 61 aa1.99□□□□□ -2.09
PTPN3-205ENST00000447271 MT1LQ93083 61 aa1.99□□□□□ -2.09
PTPN3-205ENST00000447271 KRTAP19-7Q3SYF9 63 aa1.98□□□□□ -2.09
PTPN3-205ENST00000447271 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
PTPN3-205ENST00000447271 KRTAP19-3Q7Z4W3 81 aa1.92□□□□□ -2.1
PTPN3-205ENST00000447271 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
PTPN3-205ENST00000447271 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
PTPN3-205ENST00000447271 MT1MQ8N339 61 aa1.85□□□□□ -2.11
PTPN3-205ENST00000447271 MT1AP04731 61 aa1.76□□□□□ -2.13
PTPN3-205ENST00000447271 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
PTPN3-205ENST00000447271 KRTAP6-1Q3LI64 71 aa1.6□□□□□ -2.15
PTPN3-205ENST00000447271 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
PTPN3-205ENST00000447271 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
PTPN3-205ENST00000447271 PRM1P04553 51 aa1.44□□□□□ -2.18
PTPN3-205ENST00000447271 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
PTPN3-205ENST00000447271 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 58.1 ms