RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
APOE-204ENST00000446996 KRTAP19-3Q7Z4W3 81 aa8.02□□□□□ -1.13
APOE-204ENST00000446996 LCE5AQ5TCM9 118 aa7.99□□□□□ -1.13
APOE-204ENST00000446996 LCE3BQ5TA77 95 aa7.92□□□□□ -1.14
APOE-204ENST00000446996 MT1GP13640 62 aa7.91□□□□□ -1.14
APOE-204ENST00000446996 KRTAP23-1A1A580 65 aa7.88□□□□□ -1.15
APOE-204ENST00000446996 MT1LQ93083 61 aa7.85□□□□□ -1.15
APOE-204ENST00000446996 PP632Q6XCG6 107 aa7.84□□□□□ -1.15
APOE-204ENST00000446996 KRTAP12-3P60328 96 aa7.83□□□□□ -1.16
APOE-204ENST00000446996 ROMO1P60602 79 aa7.81□□□□□ -1.16
APOE-204ENST00000446996 MT1MQ8N339 61 aa7.72□□□□□ -1.17
APOE-204ENST00000446996 DSTQ03001 7570 aaKnown RBP7.66□□□□□ -1.18
APOE-204ENST00000446996 KRTAP19-4Q3LI73 84 aa7.59□□□□□ -1.19
APOE-204ENST00000446996 GPR98Q8WXG9 6306 aa7.51□□□□□ -1.21
APOE-204ENST00000446996 BRK1Q8WUW1 75 aa7.51□□□□□ -1.21
APOE-204ENST00000446996 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
APOE-204ENST00000446996 KRTAP4-3Q9BYR4 195 aa7.45□□□□□ -1.22
APOE-204ENST00000446996 KRTAP4-9Q9BYQ8 210 aa7.43□□□□□ -1.22
APOE-204ENST00000446996 KRTAP4-7Q9BYR0 210 aa7.41□□□□□ -1.22
APOE-204ENST00000446996 LCE3CQ5T5A8 94 aa7.26□□□□□ -1.25
APOE-204ENST00000446996 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
APOE-204ENST00000446996 LCE1DQ5T752 114 aa7.25□□□□□ -1.25
APOE-204ENST00000446996 HMCN1Q96RW7 5635 aa7.25□□□□□ -1.25
APOE-204ENST00000446996 KRTAP5-4Q6L8H1 288 aa7.19□□□□□ -1.26
APOE-204ENST00000446996 MT4P47944 62 aa7.13□□□□□ -1.27
APOE-204ENST00000446996 PMAIP1Q13794 54 aa7.12□□□□□ -1.27
APOE-204ENST00000446996 KRTAP5-5Q701N2 237 aaPredicted RBP7.07□□□□□ -1.28
APOE-204ENST00000446996 AHNAK2Q8IVF2 5795 aa7.05□□□□□ -1.28
APOE-204ENST00000446996 LOC100996750A0A140TA64 210 aa7□□□□□ -1.29
APOE-204ENST00000446996 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
APOE-204ENST00000446996 PRO0628Q9UI54 55 aa6.93□□□□□ -1.3
APOE-204ENST00000446996 KRTAP5-10Q6L8G5 202 aa6.82□□□□□ -1.32
APOE-204ENST00000446996 KRTAP12-4P60329 112 aa6.8□□□□□ -1.32
APOE-204ENST00000446996 SPRR5A0A1B0GTR4 108 aa6.79□□□□□ -1.32
APOE-204ENST00000446996 KRTAP9-6A8MVA2 160 aa6.79□□□□□ -1.32
APOE-204ENST00000446996 SYNE1Q8NF91 8797 aaKnown RBP6.75□□□□□ -1.33
APOE-204ENST00000446996 KRTAP20-2Q3LI61 65 aa6.72□□□□□ -1.33
APOE-204ENST00000446996 MT1AP04731 61 aa6.71□□□□□ -1.34
APOE-204ENST00000446996 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
APOE-204ENST00000446996 KRTAP5-3Q6L8H2 238 aa6.61□□□□□ -1.35
APOE-204ENST00000446996 KRTAP6-1Q3LI64 71 aa6.6□□□□□ -1.35
APOE-204ENST00000446996 KRTAP5-7Q6L8G8 165 aa6.56□□□□□ -1.36
APOE-204ENST00000446996 KTN1-AS1Q86SY8 53 aa6.54□□□□□ -1.36
APOE-204ENST00000446996 KRTAP9-4Q9BYQ2 154 aa6.45□□□□□ -1.38
APOE-204ENST00000446996 KRTAP5-2Q701N4 177 aa6.36□□□□□ -1.39
APOE-204ENST00000446996 KRTAP6-2Q3LI66 62 aa6.22□□□□□ -1.41
APOE-204ENST00000446996 SVIPQ8NHG7 77 aa6.15□□□□□ -1.42
APOE-204ENST00000446996 MT3P25713 68 aa6.14□□□□□ -1.43
APOE-204ENST00000446996 KRTAP4-11Q9BYQ6 195 aa6.1□□□□□ -1.43
APOE-204ENST00000446996 KRTAP5-8O75690 187 aa5.92□□□□□ -1.46
APOE-204ENST00000446996 MUC5BQ9HC84 5762 aaPredicted RBP5.85□□□□□ -1.47
APOE-204ENST00000446996 AHNAKQ09666 5890 aaKnown RBP5.84□□□□□ -1.47
APOE-204ENST00000446996 OBSCNQ5VST9 7968 aa5.83□□□□□ -1.48
APOE-204ENST00000446996 MUC5ACP98088 5654 aa5.81□□□□□ -1.48
APOE-204ENST00000446996 LUZP6Q538Z0 58 aa5.69□□□□□ -1.5
APOE-204ENST00000446996 KRTAP5-1Q6L8H4 278 aa5.62□□□□□ -1.51
APOE-204ENST00000446996 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
APOE-204ENST00000446996 LCE1EQ5T753 118 aa5.58□□□□□ -1.52
APOE-204ENST00000446996 LCE3DQ9BYE3 92 aa5.32□□□□□ -1.56
APOE-204ENST00000446996 KRTAP4-2Q9BYR5 136 aa5.17□□□□□ -1.58
APOE-204ENST00000446996 LCE1CQ5T751 118 aa5.16□□□□□ -1.58
APOE-204ENST00000446996 LCE1BQ5T7P3 118 aa5.16□□□□□ -1.58
APOE-204ENST00000446996 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
APOE-204ENST00000446996 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
APOE-204ENST00000446996 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.77□□□□□ -1.65
APOE-204ENST00000446996 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
APOE-204ENST00000446996 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
APOE-204ENST00000446996 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
APOE-204ENST00000446996 KRTAP21-2Q3LI59 83 aa4.37□□□□□ -1.71
APOE-204ENST00000446996 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
APOE-204ENST00000446996 INE1O15225 51 aa4.06□□□□□ -1.76
APOE-204ENST00000446996 PRM1P04553 51 aa3.98□□□□□ -1.77
APOE-204ENST00000446996 PHGR1C9JFL3 82 aa3.97□□□□□ -1.77
APOE-204ENST00000446996 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
APOE-204ENST00000446996 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
APOE-204ENST00000446996 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
APOE-204ENST00000446996 H3BS24 57 aa2.91□□□□□ -1.94
APOE-204ENST00000446996 MUC16Q8WXI7 14507 aa2.57□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms