RNA–Protein interactions for RNA: ENST00000446936.6

CNBP-203, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNBP, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-203ENST00000446936 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
CNBP-203ENST00000446936 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
CNBP-203ENST00000446936 KRTAP4-2Q9BYR5 136 aa5.3□□□□□ -1.56
CNBP-203ENST00000446936 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
CNBP-203ENST00000446936 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
CNBP-203ENST00000446936 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
CNBP-203ENST00000446936 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
CNBP-203ENST00000446936 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
CNBP-203ENST00000446936 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
CNBP-203ENST00000446936 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
CNBP-203ENST00000446936 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
CNBP-203ENST00000446936 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
CNBP-203ENST00000446936 MT1EP04732 61 aa5.1□□□□□ -1.59
CNBP-203ENST00000446936 MUC12Q9UKN1 5478 aa5.02□□□□□ -1.61
CNBP-203ENST00000446936 MT1LQ93083 61 aa4.99□□□□□ -1.61
CNBP-203ENST00000446936 SPRR2EP22531 72 aa4.97□□□□□ -1.61
CNBP-203ENST00000446936 SPRR2BP35325 72 aa4.97□□□□□ -1.61
CNBP-203ENST00000446936 SPRR2AP35326 72 aa4.97□□□□□ -1.61
CNBP-203ENST00000446936 NEBP20929 6669 aa4.97□□□□□ -1.61
CNBP-203ENST00000446936 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
CNBP-203ENST00000446936 KRTAP19-3Q7Z4W3 81 aa4.94□□□□□ -1.62
CNBP-203ENST00000446936 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.62
CNBP-203ENST00000446936 MT1GP13640 62 aa4.89□□□□□ -1.63
CNBP-203ENST00000446936 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
CNBP-203ENST00000446936 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
CNBP-203ENST00000446936 MT1MQ8N339 61 aa4.82□□□□□ -1.64
CNBP-203ENST00000446936 SPRR2DP22532 72 aa4.81□□□□□ -1.64
CNBP-203ENST00000446936 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
CNBP-203ENST00000446936 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
CNBP-203ENST00000446936 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
CNBP-203ENST00000446936 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
CNBP-203ENST00000446936 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
CNBP-203ENST00000446936 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
CNBP-203ENST00000446936 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
CNBP-203ENST00000446936 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
CNBP-203ENST00000446936 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
CNBP-203ENST00000446936 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
CNBP-203ENST00000446936 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
CNBP-203ENST00000446936 DSTQ03001 7570 aaKnown RBP4.48□□□□□ -1.69
CNBP-203ENST00000446936 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
CNBP-203ENST00000446936 MT1AP04731 61 aa4.25□□□□□ -1.73
CNBP-203ENST00000446936 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.73
CNBP-203ENST00000446936 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
CNBP-203ENST00000446936 MT4P47944 62 aa4.16□□□□□ -1.74
CNBP-203ENST00000446936 KRTAP12-4P60329 112 aa4.09□□□□□ -1.76
CNBP-203ENST00000446936 HMCN1Q96RW7 5635 aa4.07□□□□□ -1.76
CNBP-203ENST00000446936 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
CNBP-203ENST00000446936 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
CNBP-203ENST00000446936 INE1O15225 51 aa3.98□□□□□ -1.77
CNBP-203ENST00000446936 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
CNBP-203ENST00000446936 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
CNBP-203ENST00000446936 MT3P25713 68 aa3.88□□□□□ -1.79
CNBP-203ENST00000446936 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
CNBP-203ENST00000446936 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
CNBP-203ENST00000446936 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
CNBP-203ENST00000446936 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
CNBP-203ENST00000446936 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
CNBP-203ENST00000446936 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
CNBP-203ENST00000446936 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
CNBP-203ENST00000446936 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
CNBP-203ENST00000446936 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
CNBP-203ENST00000446936 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
CNBP-203ENST00000446936 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
CNBP-203ENST00000446936 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
CNBP-203ENST00000446936 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
CNBP-203ENST00000446936 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
CNBP-203ENST00000446936 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
CNBP-203ENST00000446936 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
CNBP-203ENST00000446936 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
CNBP-203ENST00000446936 PRM1P04553 51 aa3.08□□□□□ -1.92
CNBP-203ENST00000446936 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
CNBP-203ENST00000446936 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
CNBP-203ENST00000446936 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
CNBP-203ENST00000446936 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
CNBP-203ENST00000446936 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
CNBP-203ENST00000446936 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
CNBP-203ENST00000446936 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 13.7 ms