RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 SPRR2FQ96RM1 72 aa2.61□□□□□ -1.99
LINC01880-201ENST00000446593 KRTAP19-8Q3LI54 63 aa2.6□□□□□ -1.99
LINC01880-201ENST00000446593 ADM2Q7Z4H4 148 aa2.6□□□□□ -1.99
LINC01880-201ENST00000446593 R4GN34 69 aa2.6□□□□□ -1.99
LINC01880-201ENST00000446593 SPRR2GQ9BYE4 73 aa2.59□□□□□ -1.99
LINC01880-201ENST00000446593 MIR22HGQ0VDD5 57 aa2.58□□□□□ -2
LINC01880-201ENST00000446593 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
LINC01880-201ENST00000446593 BRK1Q8WUW1 75 aa2.57□□□□□ -2
LINC01880-201ENST00000446593 SPRR2DP22532 72 aa2.55□□□□□ -2
LINC01880-201ENST00000446593 NDUFAF8A1L188 74 aa2.54□□□□□ -2
LINC01880-201ENST00000446593 CDC42SE1Q9NRR8 79 aa2.54□□□□□ -2
LINC01880-201ENST00000446593 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
LINC01880-201ENST00000446593 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
LINC01880-201ENST00000446593 SPATA8Q6RVD6 105 aa2.51□□□□□ -2.01
LINC01880-201ENST00000446593 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
LINC01880-201ENST00000446593 LINC01554Q52M75 96 aa2.5□□□□□ -2.01
LINC01880-201ENST00000446593 PLAC4Q8WY50 150 aa2.5□□□□□ -2.01
LINC01880-201ENST00000446593 PRO0628Q9UI54 55 aa2.5□□□□□ -2.01
LINC01880-201ENST00000446593 MT3P25713 68 aa2.48□□□□□ -2.01
LINC01880-201ENST00000446593 CAMK2N1Q7Z7J9 78 aa2.48□□□□□ -2.01
LINC01880-201ENST00000446593 A0A0D9SG42 100 aa2.47□□□□□ -2.01
LINC01880-201ENST00000446593 P0C880 135 aa2.47□□□□□ -2.01
LINC01880-201ENST00000446593 SPINT4Q6UDR6 99 aa2.47□□□□□ -2.01
LINC01880-201ENST00000446593 PMAIP1Q13794 54 aa2.46□□□□□ -2.02
LINC01880-201ENST00000446593 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
LINC01880-201ENST00000446593 DSTQ03001 7570 aaKnown RBP2.41□□□□□ -2.02
LINC01880-201ENST00000446593 MT1XP80297 61 aa2.41□□□□□ -2.02
LINC01880-201ENST00000446593 KRTAP13-4Q3LI77 160 aa2.41□□□□□ -2.02
LINC01880-201ENST00000446593 A8MU10 97 aa2.39□□□□□ -2.03
LINC01880-201ENST00000446593 ROMO1P60602 79 aa2.37□□□□□ -2.03
LINC01880-201ENST00000446593 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
LINC01880-201ENST00000446593 KRTAP10-12P60413 245 aa2.35□□□□□ -2.03
LINC01880-201ENST00000446593 TNP1P09430 55 aa2.33□□□□□ -2.04
LINC01880-201ENST00000446593 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
LINC01880-201ENST00000446593 KRTAP25-1Q3LHN0 102 aa2.32□□□□□ -2.04
LINC01880-201ENST00000446593 KTN1-AS1Q86SY8 53 aa2.32□□□□□ -2.04
LINC01880-201ENST00000446593 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
LINC01880-201ENST00000446593 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
LINC01880-201ENST00000446593 MT4P47944 62 aa2.25□□□□□ -2.05
LINC01880-201ENST00000446593 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
LINC01880-201ENST00000446593 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
LINC01880-201ENST00000446593 KRTAP19-3Q7Z4W3 81 aa2.21□□□□□ -2.06
LINC01880-201ENST00000446593 C10orf95Q9H7T3 257 aa2.19□□□□□ -2.06
LINC01880-201ENST00000446593 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
LINC01880-201ENST00000446593 SPRR5A0A1B0GTR4 108 aa2.17□□□□□ -2.06
LINC01880-201ENST00000446593 MT1EP04732 61 aa2.16□□□□□ -2.06
LINC01880-201ENST00000446593 LCE3AQ5TA76 89 aa2.16□□□□□ -2.06
LINC01880-201ENST00000446593 MT1GP13640 62 aa2.15□□□□□ -2.07
LINC01880-201ENST00000446593 KRTAP19-7Q3SYF9 63 aa2.15□□□□□ -2.07
LINC01880-201ENST00000446593 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
LINC01880-201ENST00000446593 MT1MQ8N339 61 aa2.07□□□□□ -2.08
LINC01880-201ENST00000446593 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
LINC01880-201ENST00000446593 KRTAP19-5Q3LI72 72 aa2.05□□□□□ -2.08
LINC01880-201ENST00000446593 LUZP6Q538Z0 58 aa2.05□□□□□ -2.08
LINC01880-201ENST00000446593 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.08
LINC01880-201ENST00000446593 MT1LQ93083 61 aa2.02□□□□□ -2.09
LINC01880-201ENST00000446593 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
LINC01880-201ENST00000446593 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
LINC01880-201ENST00000446593 LCE3CQ5T5A8 94 aa1.96□□□□□ -2.1
LINC01880-201ENST00000446593 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
LINC01880-201ENST00000446593 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
LINC01880-201ENST00000446593 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
LINC01880-201ENST00000446593 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
LINC01880-201ENST00000446593 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
LINC01880-201ENST00000446593 SYNE1Q8NF91 8797 aaKnown RBP1.88□□□□□ -2.11
LINC01880-201ENST00000446593 LCE3EQ5T5B0 92 aa1.79□□□□□ -2.12
LINC01880-201ENST00000446593 MT1AP04731 61 aa1.72□□□□□ -2.13
LINC01880-201ENST00000446593 KRTAP6-1Q3LI64 71 aa1.71□□□□□ -2.14
LINC01880-201ENST00000446593 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
LINC01880-201ENST00000446593 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
LINC01880-201ENST00000446593 INE1O15225 51 aa1.6□□□□□ -2.15
LINC01880-201ENST00000446593 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
LINC01880-201ENST00000446593 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
LINC01880-201ENST00000446593 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
LINC01880-201ENST00000446593 PRM1P04553 51 aa1.17□□□□□ -2.22
LINC01880-201ENST00000446593 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
LINC01880-201ENST00000446593 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 85.1 ms