RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
PTPRN-208ENST00000446182 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
PTPRN-208ENST00000446182 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
PTPRN-208ENST00000446182 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
PTPRN-208ENST00000446182 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
PTPRN-208ENST00000446182 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
PTPRN-208ENST00000446182 ROMO1P60602 79 aa3.95□□□□□ -1.78
PTPRN-208ENST00000446182 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
PTPRN-208ENST00000446182 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
PTPRN-208ENST00000446182 MT1EP04732 61 aa3.93□□□□□ -1.78
PTPRN-208ENST00000446182 A0A0D9SG42 100 aa3.92□□□□□ -1.78
PTPRN-208ENST00000446182 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
PTPRN-208ENST00000446182 SPINT4Q6UDR6 99 aa3.87□□□□□ -1.79
PTPRN-208ENST00000446182 CAMK2N1Q7Z7J9 78 aa3.86□□□□□ -1.79
PTPRN-208ENST00000446182 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
PTPRN-208ENST00000446182 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
PTPRN-208ENST00000446182 MT4P47944 62 aa3.82□□□□□ -1.8
PTPRN-208ENST00000446182 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
PTPRN-208ENST00000446182 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
PTPRN-208ENST00000446182 MT1GP13640 62 aa3.8□□□□□ -1.8
PTPRN-208ENST00000446182 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
PTPRN-208ENST00000446182 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
PTPRN-208ENST00000446182 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
PTPRN-208ENST00000446182 MT1MQ8N339 61 aa3.75□□□□□ -1.81
PTPRN-208ENST00000446182 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
PTPRN-208ENST00000446182 MT1LQ93083 61 aa3.71□□□□□ -1.82
PTPRN-208ENST00000446182 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
PTPRN-208ENST00000446182 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
PTPRN-208ENST00000446182 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
PTPRN-208ENST00000446182 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
PTPRN-208ENST00000446182 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
PTPRN-208ENST00000446182 TNP1P09430 55 aa3.63□□□□□ -1.83
PTPRN-208ENST00000446182 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
PTPRN-208ENST00000446182 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
PTPRN-208ENST00000446182 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
PTPRN-208ENST00000446182 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
PTPRN-208ENST00000446182 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
PTPRN-208ENST00000446182 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
PTPRN-208ENST00000446182 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
PTPRN-208ENST00000446182 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.87
PTPRN-208ENST00000446182 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
PTPRN-208ENST00000446182 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
PTPRN-208ENST00000446182 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
PTPRN-208ENST00000446182 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
PTPRN-208ENST00000446182 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
PTPRN-208ENST00000446182 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
PTPRN-208ENST00000446182 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
PTPRN-208ENST00000446182 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
PTPRN-208ENST00000446182 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
PTPRN-208ENST00000446182 MT1AP04731 61 aa3.15□□□□□ -1.91
PTPRN-208ENST00000446182 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
PTPRN-208ENST00000446182 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
PTPRN-208ENST00000446182 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
PTPRN-208ENST00000446182 H3BS24 57 aa3.07□□□□□ -1.92
PTPRN-208ENST00000446182 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
PTPRN-208ENST00000446182 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
PTPRN-208ENST00000446182 A0A0A0MQY5 61 aa3.02□□□□□ -1.93
PTPRN-208ENST00000446182 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
PTPRN-208ENST00000446182 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
PTPRN-208ENST00000446182 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
PTPRN-208ENST00000446182 MT3P25713 68 aa2.88□□□□□ -1.95
PTPRN-208ENST00000446182 INE1O15225 51 aa2.82□□□□□ -1.96
PTPRN-208ENST00000446182 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
PTPRN-208ENST00000446182 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
PTPRN-208ENST00000446182 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
PTPRN-208ENST00000446182 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
PTPRN-208ENST00000446182 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
PTPRN-208ENST00000446182 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
PTPRN-208ENST00000446182 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
PTPRN-208ENST00000446182 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
PTPRN-208ENST00000446182 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
PTPRN-208ENST00000446182 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
PTPRN-208ENST00000446182 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
PTPRN-208ENST00000446182 PRM1P04553 51 aa1.99□□□□□ -2.09
PTPRN-208ENST00000446182 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
PTPRN-208ENST00000446182 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
PTPRN-208ENST00000446182 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
PTPRN-208ENST00000446182 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 95.5 ms