RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
SGCE-206ENST00000445866 H3BS24 57 aa6.6□□□□□ -1.35
SGCE-206ENST00000445866 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
SGCE-206ENST00000445866 SPRR2FQ96RM1 72 aa6.59□□□□□ -1.35
SGCE-206ENST00000445866 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
SGCE-206ENST00000445866 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
SGCE-206ENST00000445866 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
SGCE-206ENST00000445866 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
SGCE-206ENST00000445866 MDN1Q9NU22 5596 aa6.46□□□□□ -1.37
SGCE-206ENST00000445866 MT1EP04732 61 aa6.4□□□□□ -1.38
SGCE-206ENST00000445866 PP632Q6XCG6 107 aa6.39□□□□□ -1.39
SGCE-206ENST00000445866 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
SGCE-206ENST00000445866 SPRR2EP22531 72 aa6.36□□□□□ -1.39
SGCE-206ENST00000445866 SPRR2BP35325 72 aa6.36□□□□□ -1.39
SGCE-206ENST00000445866 SPRR2AP35326 72 aa6.36□□□□□ -1.39
SGCE-206ENST00000445866 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
SGCE-206ENST00000445866 LCE1AQ5T7P2 110 aa6.33□□□□□ -1.4
SGCE-206ENST00000445866 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
SGCE-206ENST00000445866 NEBP20929 6669 aa6.28□□□□□ -1.4
SGCE-206ENST00000445866 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
SGCE-206ENST00000445866 MT1LQ93083 61 aa6.21□□□□□ -1.42
SGCE-206ENST00000445866 MT1GP13640 62 aa6.17□□□□□ -1.42
SGCE-206ENST00000445866 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
SGCE-206ENST00000445866 SPRR2DP22532 72 aa6.13□□□□□ -1.43
SGCE-206ENST00000445866 MT1MQ8N339 61 aa6.05□□□□□ -1.44
SGCE-206ENST00000445866 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
SGCE-206ENST00000445866 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
SGCE-206ENST00000445866 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
SGCE-206ENST00000445866 KRTAP20-1Q3LI63 56 aa5.95□□□□□ -1.46
SGCE-206ENST00000445866 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
SGCE-206ENST00000445866 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
SGCE-206ENST00000445866 DSTQ03001 7570 aaKnown RBP5.87□□□□□ -1.47
SGCE-206ENST00000445866 KRTAP2-2Q9BYT5 123 aa5.81□□□□□ -1.48
SGCE-206ENST00000445866 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
SGCE-206ENST00000445866 NDUFAF8A1L188 74 aa5.73□□□□□ -1.49
SGCE-206ENST00000445866 SPRR5A0A1B0GTR4 108 aa5.56□□□□□ -1.52
SGCE-206ENST00000445866 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
SGCE-206ENST00000445866 LUZP6Q538Z0 58 aa5.56□□□□□ -1.52
SGCE-206ENST00000445866 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
SGCE-206ENST00000445866 A0A0A0MQY5 61 aa5.44□□□□□ -1.54
SGCE-206ENST00000445866 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
SGCE-206ENST00000445866 MT4P47944 62 aa5.34□□□□□ -1.55
SGCE-206ENST00000445866 MT1AP04731 61 aa5.28□□□□□ -1.56
SGCE-206ENST00000445866 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
SGCE-206ENST00000445866 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
SGCE-206ENST00000445866 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
SGCE-206ENST00000445866 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.57
SGCE-206ENST00000445866 KRTAP20-2Q3LI61 65 aa5.1□□□□□ -1.59
SGCE-206ENST00000445866 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
SGCE-206ENST00000445866 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
SGCE-206ENST00000445866 MT3P25713 68 aa4.84□□□□□ -1.63
SGCE-206ENST00000445866 KRTAP5-2Q701N4 177 aa4.83□□□□□ -1.64
SGCE-206ENST00000445866 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
SGCE-206ENST00000445866 INE1O15225 51 aa4.81□□□□□ -1.64
SGCE-206ENST00000445866 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
SGCE-206ENST00000445866 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
SGCE-206ENST00000445866 KRTAP5-11Q6L8G4 156 aa4.59□□□□□ -1.67
SGCE-206ENST00000445866 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
SGCE-206ENST00000445866 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
SGCE-206ENST00000445866 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
SGCE-206ENST00000445866 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
SGCE-206ENST00000445866 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
SGCE-206ENST00000445866 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
SGCE-206ENST00000445866 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
SGCE-206ENST00000445866 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
SGCE-206ENST00000445866 KRTAP4-4Q9BYR3 166 aa4.16□□□□□ -1.74
SGCE-206ENST00000445866 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
SGCE-206ENST00000445866 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
SGCE-206ENST00000445866 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
SGCE-206ENST00000445866 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.79
SGCE-206ENST00000445866 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
SGCE-206ENST00000445866 PRM1P04553 51 aa3.49□□□□□ -1.85
SGCE-206ENST00000445866 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
SGCE-206ENST00000445866 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
SGCE-206ENST00000445866 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
SGCE-206ENST00000445866 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
SGCE-206ENST00000445866 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 73.9 ms