RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
SYN3-204ENST00000441821 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
SYN3-204ENST00000441821 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
SYN3-204ENST00000441821 H3BS24 57 aa3.88□□□□□ -1.79
SYN3-204ENST00000441821 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
SYN3-204ENST00000441821 PMAIP1Q13794 54 aa3.87□□□□□ -1.79
SYN3-204ENST00000441821 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
SYN3-204ENST00000441821 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
SYN3-204ENST00000441821 MT4P47944 62 aa3.79□□□□□ -1.8
SYN3-204ENST00000441821 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
SYN3-204ENST00000441821 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
SYN3-204ENST00000441821 ROMO1P60602 79 aa3.78□□□□□ -1.8
SYN3-204ENST00000441821 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
SYN3-204ENST00000441821 MT1EP04732 61 aa3.74□□□□□ -1.81
SYN3-204ENST00000441821 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
SYN3-204ENST00000441821 TNP1P09430 55 aa3.71□□□□□ -1.82
SYN3-204ENST00000441821 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
SYN3-204ENST00000441821 MT1GP13640 62 aa3.67□□□□□ -1.82
SYN3-204ENST00000441821 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
SYN3-204ENST00000441821 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
SYN3-204ENST00000441821 KRTAP4-6Q9BYQ5 205 aa3.64□□□□□ -1.83
SYN3-204ENST00000441821 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
SYN3-204ENST00000441821 PP632Q6XCG6 107 aa3.63□□□□□ -1.83
SYN3-204ENST00000441821 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
SYN3-204ENST00000441821 MT1MQ8N339 61 aa3.58□□□□□ -1.84
SYN3-204ENST00000441821 KRTAP23-1A1A580 65 aa3.57□□□□□ -1.84
SYN3-204ENST00000441821 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
SYN3-204ENST00000441821 KRTAP19-5Q3LI72 72 aa3.55□□□□□ -1.84
SYN3-204ENST00000441821 MT1LQ93083 61 aa3.5□□□□□ -1.85
SYN3-204ENST00000441821 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
SYN3-204ENST00000441821 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
SYN3-204ENST00000441821 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
SYN3-204ENST00000441821 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
SYN3-204ENST00000441821 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
SYN3-204ENST00000441821 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
SYN3-204ENST00000441821 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
SYN3-204ENST00000441821 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
SYN3-204ENST00000441821 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
SYN3-204ENST00000441821 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
SYN3-204ENST00000441821 KRTAP4-7Q9BYR0 210 aa3.3□□□□□ -1.88
SYN3-204ENST00000441821 KRTAP15-1Q3LI76 137 aa3.27□□□□□ -1.89
SYN3-204ENST00000441821 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
SYN3-204ENST00000441821 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
SYN3-204ENST00000441821 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
SYN3-204ENST00000441821 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
SYN3-204ENST00000441821 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
SYN3-204ENST00000441821 LOC100996750A0A140TA64 210 aa3.15□□□□□ -1.91
SYN3-204ENST00000441821 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
SYN3-204ENST00000441821 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
SYN3-204ENST00000441821 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
SYN3-204ENST00000441821 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
SYN3-204ENST00000441821 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
SYN3-204ENST00000441821 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
SYN3-204ENST00000441821 MT1AP04731 61 aa2.97□□□□□ -1.93
SYN3-204ENST00000441821 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
SYN3-204ENST00000441821 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
SYN3-204ENST00000441821 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
SYN3-204ENST00000441821 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
SYN3-204ENST00000441821 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
SYN3-204ENST00000441821 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
SYN3-204ENST00000441821 MT3P25713 68 aa2.75□□□□□ -1.97
SYN3-204ENST00000441821 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
SYN3-204ENST00000441821 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
SYN3-204ENST00000441821 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
SYN3-204ENST00000441821 INE1O15225 51 aa2.44□□□□□ -2.02
SYN3-204ENST00000441821 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
SYN3-204ENST00000441821 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
SYN3-204ENST00000441821 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
SYN3-204ENST00000441821 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
SYN3-204ENST00000441821 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
SYN3-204ENST00000441821 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
SYN3-204ENST00000441821 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
SYN3-204ENST00000441821 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
SYN3-204ENST00000441821 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
SYN3-204ENST00000441821 PRM1P04553 51 aa1.92□□□□□ -2.1
SYN3-204ENST00000441821 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
SYN3-204ENST00000441821 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SYN3-204ENST00000441821 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 43 ms