RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
HDAC6-210ENST00000441703 KRTAP23-1A1A580 65 aa2.85□□□□□ -1.95
HDAC6-210ENST00000441703 MT1BP07438 61 aa2.85□□□□□ -1.95
HDAC6-210ENST00000441703 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
HDAC6-210ENST00000441703 R4GN34 69 aa2.83□□□□□ -1.96
HDAC6-210ENST00000441703 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
HDAC6-210ENST00000441703 KRTAP8-1Q8IUC2 63 aa2.81□□□□□ -1.96
HDAC6-210ENST00000441703 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
HDAC6-210ENST00000441703 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
HDAC6-210ENST00000441703 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
HDAC6-210ENST00000441703 KRTAP4-9Q9BYQ8 210 aa2.79□□□□□ -1.96
HDAC6-210ENST00000441703 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
HDAC6-210ENST00000441703 SPRR2GQ9BYE4 73 aa2.77□□□□□ -1.97
HDAC6-210ENST00000441703 INE1O15225 51 aa2.76□□□□□ -1.97
HDAC6-210ENST00000441703 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
HDAC6-210ENST00000441703 TNP1P09430 55 aa2.71□□□□□ -1.98
HDAC6-210ENST00000441703 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
HDAC6-210ENST00000441703 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
HDAC6-210ENST00000441703 KRTAP4-8A0A0G2JLE6 195 aa2.61□□□□□ -1.99
HDAC6-210ENST00000441703 KRTAP4-8Q9BYQ9 185 aa2.61□□□□□ -1.99
HDAC6-210ENST00000441703 MT4P47944 62 aa2.6□□□□□ -1.99
HDAC6-210ENST00000441703 MT1XP80297 61 aa2.6□□□□□ -1.99
HDAC6-210ENST00000441703 LCE4AQ5TA78 99 aa2.55□□□□□ -2
HDAC6-210ENST00000441703 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
HDAC6-210ENST00000441703 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
HDAC6-210ENST00000441703 KRTAP10-12P60413 245 aa2.48□□□□□ -2.01
HDAC6-210ENST00000441703 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
HDAC6-210ENST00000441703 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
HDAC6-210ENST00000441703 KRTAP10-7P60409 375 aaPredicted RBP2.46□□□□□ -2.02
HDAC6-210ENST00000441703 LCE5AQ5TCM9 118 aa2.44□□□□□ -2.02
HDAC6-210ENST00000441703 KRTAP4-6Q9BYQ5 205 aa2.43□□□□□ -2.02
HDAC6-210ENST00000441703 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
HDAC6-210ENST00000441703 KRTAP12-3P60328 96 aa2.37□□□□□ -2.03
HDAC6-210ENST00000441703 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
HDAC6-210ENST00000441703 MT1EP04732 61 aa2.33□□□□□ -2.04
HDAC6-210ENST00000441703 KRTAP19-7Q3SYF9 63 aa2.33□□□□□ -2.04
HDAC6-210ENST00000441703 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
HDAC6-210ENST00000441703 MT1GP13640 62 aa2.29□□□□□ -2.04
HDAC6-210ENST00000441703 KRTAP4-7Q9BYR0 210 aa2.29□□□□□ -2.04
HDAC6-210ENST00000441703 LCE3CQ5T5A8 94 aa2.26□□□□□ -2.05
HDAC6-210ENST00000441703 KRTAP19-4Q3LI73 84 aa2.25□□□□□ -2.05
HDAC6-210ENST00000441703 MT1MQ8N339 61 aa2.24□□□□□ -2.05
HDAC6-210ENST00000441703 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
HDAC6-210ENST00000441703 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
HDAC6-210ENST00000441703 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
HDAC6-210ENST00000441703 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
HDAC6-210ENST00000441703 KRTAP19-5Q3LI72 72 aa2.17□□□□□ -2.06
HDAC6-210ENST00000441703 MT1LQ93083 61 aa2.17□□□□□ -2.06
HDAC6-210ENST00000441703 KRTAP9-6A8MVA2 160 aa2.15□□□□□ -2.07
HDAC6-210ENST00000441703 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.07
HDAC6-210ENST00000441703 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
HDAC6-210ENST00000441703 LOC100996750A0A140TA64 210 aa2.08□□□□□ -2.08
HDAC6-210ENST00000441703 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
HDAC6-210ENST00000441703 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
HDAC6-210ENST00000441703 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
HDAC6-210ENST00000441703 MT1AP04731 61 aa1.89□□□□□ -2.11
HDAC6-210ENST00000441703 KRTAP9-4Q9BYQ2 154 aa1.89□□□□□ -2.11
HDAC6-210ENST00000441703 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
HDAC6-210ENST00000441703 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
HDAC6-210ENST00000441703 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.11
HDAC6-210ENST00000441703 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.11
HDAC6-210ENST00000441703 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
HDAC6-210ENST00000441703 PRM1P04553 51 aa1.78□□□□□ -2.12
HDAC6-210ENST00000441703 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
HDAC6-210ENST00000441703 MT3P25713 68 aa1.71□□□□□ -2.14
HDAC6-210ENST00000441703 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
HDAC6-210ENST00000441703 LCE1EQ5T753 118 aa1.65□□□□□ -2.15
HDAC6-210ENST00000441703 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
HDAC6-210ENST00000441703 KRTAP4-12Q9BQ66 201 aa1.63□□□□□ -2.15
HDAC6-210ENST00000441703 LCE1CQ5T751 118 aa1.53□□□□□ -2.16
HDAC6-210ENST00000441703 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
HDAC6-210ENST00000441703 LCE1FQ5T754 118 aa1.5□□□□□ -2.17
HDAC6-210ENST00000441703 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
HDAC6-210ENST00000441703 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
HDAC6-210ENST00000441703 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
HDAC6-210ENST00000441703 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
HDAC6-210ENST00000441703 KRTAP4-4Q9BYR3 166 aa1.19□□□□□ -2.22
HDAC6-210ENST00000441703 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 115 ms