RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 MT1XP80297 61 aa3.71□□□□□ -1.82
HDAC6-209ENST00000440653 KRTAP10-5P60370 271 aa3.7□□□□□ -1.82
HDAC6-209ENST00000440653 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
HDAC6-209ENST00000440653 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
HDAC6-209ENST00000440653 SPRR2DP22532 72 aa3.66□□□□□ -1.82
HDAC6-209ENST00000440653 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
HDAC6-209ENST00000440653 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
HDAC6-209ENST00000440653 LCE3AQ5TA76 89 aa3.65□□□□□ -1.83
HDAC6-209ENST00000440653 KRTAP8-1Q8IUC2 63 aa3.64□□□□□ -1.83
HDAC6-209ENST00000440653 LCE3BQ5TA77 95 aa3.62□□□□□ -1.83
HDAC6-209ENST00000440653 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
HDAC6-209ENST00000440653 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
HDAC6-209ENST00000440653 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.84
HDAC6-209ENST00000440653 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
HDAC6-209ENST00000440653 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
HDAC6-209ENST00000440653 HMCN1Q96RW7 5635 aa3.53□□□□□ -1.84
HDAC6-209ENST00000440653 KRTAP12-3P60328 96 aa3.53□□□□□ -1.84
HDAC6-209ENST00000440653 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
HDAC6-209ENST00000440653 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
HDAC6-209ENST00000440653 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
HDAC6-209ENST00000440653 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
HDAC6-209ENST00000440653 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
HDAC6-209ENST00000440653 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
HDAC6-209ENST00000440653 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
HDAC6-209ENST00000440653 KRTAP4-8A0A0G2JLE6 195 aa3.29□□□□□ -1.88
HDAC6-209ENST00000440653 MT4P47944 62 aa3.29□□□□□ -1.88
HDAC6-209ENST00000440653 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
HDAC6-209ENST00000440653 KRTAP4-8Q9BYQ9 185 aa3.29□□□□□ -1.88
HDAC6-209ENST00000440653 MT1EP04732 61 aa3.26□□□□□ -1.89
HDAC6-209ENST00000440653 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
HDAC6-209ENST00000440653 MT1LQ93083 61 aa3.22□□□□□ -1.89
HDAC6-209ENST00000440653 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
HDAC6-209ENST00000440653 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
HDAC6-209ENST00000440653 KRTAP4-6Q9BYQ5 205 aa3.14□□□□□ -1.91
HDAC6-209ENST00000440653 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
HDAC6-209ENST00000440653 MT1GP13640 62 aa3.09□□□□□ -1.91
HDAC6-209ENST00000440653 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
HDAC6-209ENST00000440653 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
HDAC6-209ENST00000440653 INE1O15225 51 aa3.05□□□□□ -1.92
HDAC6-209ENST00000440653 MT1MQ8N339 61 aa3.05□□□□□ -1.92
HDAC6-209ENST00000440653 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
HDAC6-209ENST00000440653 LCE5AQ5TCM9 118 aa3.04□□□□□ -1.92
HDAC6-209ENST00000440653 KRTAP4-7Q9BYR0 210 aa3.03□□□□□ -1.92
HDAC6-209ENST00000440653 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
HDAC6-209ENST00000440653 LOC100996750A0A140TA64 210 aa2.89□□□□□ -1.95
HDAC6-209ENST00000440653 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
HDAC6-209ENST00000440653 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
HDAC6-209ENST00000440653 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
HDAC6-209ENST00000440653 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
HDAC6-209ENST00000440653 MT1AP04731 61 aa2.77□□□□□ -1.97
HDAC6-209ENST00000440653 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
HDAC6-209ENST00000440653 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
HDAC6-209ENST00000440653 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
HDAC6-209ENST00000440653 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
HDAC6-209ENST00000440653 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
HDAC6-209ENST00000440653 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
HDAC6-209ENST00000440653 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
HDAC6-209ENST00000440653 KRTAP9-4Q9BYQ2 154 aa2.6□□□□□ -1.99
HDAC6-209ENST00000440653 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
HDAC6-209ENST00000440653 MT3P25713 68 aa2.49□□□□□ -2.01
HDAC6-209ENST00000440653 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
HDAC6-209ENST00000440653 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
HDAC6-209ENST00000440653 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
HDAC6-209ENST00000440653 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
HDAC6-209ENST00000440653 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
HDAC6-209ENST00000440653 PRM1P04553 51 aa2.23□□□□□ -2.05
HDAC6-209ENST00000440653 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
HDAC6-209ENST00000440653 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
HDAC6-209ENST00000440653 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
HDAC6-209ENST00000440653 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
HDAC6-209ENST00000440653 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
HDAC6-209ENST00000440653 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
HDAC6-209ENST00000440653 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
HDAC6-209ENST00000440653 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
HDAC6-209ENST00000440653 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
HDAC6-209ENST00000440653 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
HDAC6-209ENST00000440653 KRTAP4-4Q9BYR3 166 aa1.53□□□□□ -2.16
HDAC6-209ENST00000440653 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 83.3 ms