RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 SPATA8Q6RVD6 105 aa4.71□□□□□ -1.66
LMO3-207ENST00000439600 KRTAP13-4Q3LI77 160 aa4.7□□□□□ -1.66
LMO3-207ENST00000439600 MT1BP07438 61 aa4.68□□□□□ -1.66
LMO3-207ENST00000439600 A0A0D9SG42 100 aa4.65□□□□□ -1.67
LMO3-207ENST00000439600 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
LMO3-207ENST00000439600 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
LMO3-207ENST00000439600 KRTAP19-6Q3LI70 58 aa4.62□□□□□ -1.67
LMO3-207ENST00000439600 PRO2289Q9P1D8 64 aa4.62□□□□□ -1.67
LMO3-207ENST00000439600 SPINT4Q6UDR6 99 aa4.6□□□□□ -1.67
LMO3-207ENST00000439600 KRTAP5-11Q6L8G4 156 aa4.59□□□□□ -1.67
LMO3-207ENST00000439600 KRTAP12-1P59990 96 aa4.56□□□□□ -1.68
LMO3-207ENST00000439600 ROMO1P60602 79 aa4.55□□□□□ -1.68
LMO3-207ENST00000439600 GPR98Q8WXG9 6306 aa4.53□□□□□ -1.68
LMO3-207ENST00000439600 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
LMO3-207ENST00000439600 CDC42SE1Q9NRR8 79 aa4.5□□□□□ -1.69
LMO3-207ENST00000439600 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
LMO3-207ENST00000439600 MT1XP80297 61 aa4.48□□□□□ -1.69
LMO3-207ENST00000439600 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
LMO3-207ENST00000439600 KMT2DO14686 5537 aa4.47□□□□□ -1.69
LMO3-207ENST00000439600 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
LMO3-207ENST00000439600 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
LMO3-207ENST00000439600 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
LMO3-207ENST00000439600 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
LMO3-207ENST00000439600 MDN1Q9NU22 5596 aa4.36□□□□□ -1.71
LMO3-207ENST00000439600 TNP1P09430 55 aa4.33□□□□□ -1.72
LMO3-207ENST00000439600 C10orf95Q9H7T3 257 aa4.32□□□□□ -1.72
LMO3-207ENST00000439600 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
LMO3-207ENST00000439600 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
LMO3-207ENST00000439600 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
LMO3-207ENST00000439600 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
LMO3-207ENST00000439600 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
LMO3-207ENST00000439600 SPRR2EP22531 72 aa4.07□□□□□ -1.76
LMO3-207ENST00000439600 SPRR2BP35325 72 aa4.07□□□□□ -1.76
LMO3-207ENST00000439600 SPRR2AP35326 72 aa4.07□□□□□ -1.76
LMO3-207ENST00000439600 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
LMO3-207ENST00000439600 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
LMO3-207ENST00000439600 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
LMO3-207ENST00000439600 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
LMO3-207ENST00000439600 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
LMO3-207ENST00000439600 MT1EP04732 61 aa3.96□□□□□ -1.78
LMO3-207ENST00000439600 SPRR2DP22532 72 aa3.94□□□□□ -1.78
LMO3-207ENST00000439600 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
LMO3-207ENST00000439600 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
LMO3-207ENST00000439600 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
LMO3-207ENST00000439600 MT1GP13640 62 aa3.87□□□□□ -1.79
LMO3-207ENST00000439600 MT1LQ93083 61 aa3.85□□□□□ -1.79
LMO3-207ENST00000439600 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
LMO3-207ENST00000439600 INE1O15225 51 aa3.79□□□□□ -1.8
LMO3-207ENST00000439600 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
LMO3-207ENST00000439600 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
LMO3-207ENST00000439600 MT1MQ8N339 61 aa3.74□□□□□ -1.81
LMO3-207ENST00000439600 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
LMO3-207ENST00000439600 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
LMO3-207ENST00000439600 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.83
LMO3-207ENST00000439600 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
LMO3-207ENST00000439600 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
LMO3-207ENST00000439600 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
LMO3-207ENST00000439600 MT4P47944 62 aa3.52□□□□□ -1.85
LMO3-207ENST00000439600 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.86
LMO3-207ENST00000439600 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
LMO3-207ENST00000439600 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
LMO3-207ENST00000439600 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
LMO3-207ENST00000439600 MT1AP04731 61 aa3.3□□□□□ -1.88
LMO3-207ENST00000439600 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
LMO3-207ENST00000439600 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
LMO3-207ENST00000439600 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
LMO3-207ENST00000439600 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
LMO3-207ENST00000439600 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
LMO3-207ENST00000439600 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
LMO3-207ENST00000439600 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
LMO3-207ENST00000439600 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
LMO3-207ENST00000439600 KRTAP5-8O75690 187 aa3□□□□□ -1.93
LMO3-207ENST00000439600 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
LMO3-207ENST00000439600 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
LMO3-207ENST00000439600 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
LMO3-207ENST00000439600 PRM1P04553 51 aa2.16□□□□□ -2.06
LMO3-207ENST00000439600 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
LMO3-207ENST00000439600 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 58.3 ms