RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 A0A0D9SG42 100 aa6.61□□□□□ -1.35
GTF3A-204ENST00000438571 A0A1B0GU33 70 aa6.61□□□□□ -1.35
GTF3A-204ENST00000438571 KRTAP19-5Q3LI72 72 aa6.61□□□□□ -1.35
GTF3A-204ENST00000438571 Q1T7F1 81 aa6.6□□□□□ -1.35
GTF3A-204ENST00000438571 PRR15LQ9BU68 103 aa6.6□□□□□ -1.35
GTF3A-204ENST00000438571 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
GTF3A-204ENST00000438571 V9GYY9 64 aa6.56□□□□□ -1.36
GTF3A-204ENST00000438571 PSPHP1O15172 72 aa6.55□□□□□ -1.36
GTF3A-204ENST00000438571 MT1GP13640 62 aa6.55□□□□□ -1.36
GTF3A-204ENST00000438571 HMCN1Q96RW7 5635 aa6.52□□□□□ -1.37
GTF3A-204ENST00000438571 MT4P47944 62 aa6.51□□□□□ -1.37
GTF3A-204ENST00000438571 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
GTF3A-204ENST00000438571 MT1MQ8N339 61 aa6.5□□□□□ -1.37
GTF3A-204ENST00000438571 KRTAP12-1P59990 96 aa6.47□□□□□ -1.37
GTF3A-204ENST00000438571 PP632Q6XCG6 107 aa6.45□□□□□ -1.38
GTF3A-204ENST00000438571 MT1LQ93083 61 aa6.45□□□□□ -1.38
GTF3A-204ENST00000438571 AHNAK2Q8IVF2 5795 aa6.44□□□□□ -1.38
GTF3A-204ENST00000438571 A8MU10 97 aa6.44□□□□□ -1.38
GTF3A-204ENST00000438571 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
GTF3A-204ENST00000438571 UQCR11O14957 56 aa6.41□□□□□ -1.38
GTF3A-204ENST00000438571 MIR22HGQ0VDD5 57 aa6.35□□□□□ -1.39
GTF3A-204ENST00000438571 KRTAP5-4Q6L8H1 288 aa6.34□□□□□ -1.39
GTF3A-204ENST00000438571 LCE3AQ5TA76 89 aa6.33□□□□□ -1.4
GTF3A-204ENST00000438571 C10orf95Q9H7T3 257 aa6.32□□□□□ -1.4
GTF3A-204ENST00000438571 A6NED7 52 aa6.31□□□□□ -1.4
GTF3A-204ENST00000438571 KRTAP5-10Q6L8G5 202 aa6.27□□□□□ -1.41
GTF3A-204ENST00000438571 TNP1P09430 55 aa6.16□□□□□ -1.42
GTF3A-204ENST00000438571 CDC42SE1Q9NRR8 79 aa6.14□□□□□ -1.43
GTF3A-204ENST00000438571 K7ERS5 55 aa6.05□□□□□ -1.44
GTF3A-204ENST00000438571 KRTAP5-7Q6L8G8 165 aa6.04□□□□□ -1.44
GTF3A-204ENST00000438571 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
GTF3A-204ENST00000438571 KRTAP20-2Q3LI61 65 aa6.02□□□□□ -1.45
GTF3A-204ENST00000438571 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
GTF3A-204ENST00000438571 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
GTF3A-204ENST00000438571 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
GTF3A-204ENST00000438571 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.46
GTF3A-204ENST00000438571 KRTAP23-1A1A580 65 aa5.91□□□□□ -1.46
GTF3A-204ENST00000438571 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
GTF3A-204ENST00000438571 ROMO1P60602 79 aa5.81□□□□□ -1.48
GTF3A-204ENST00000438571 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
GTF3A-204ENST00000438571 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
GTF3A-204ENST00000438571 PRO0628Q9UI54 55 aa5.67□□□□□ -1.5
GTF3A-204ENST00000438571 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
GTF3A-204ENST00000438571 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
GTF3A-204ENST00000438571 KRTAP5-2Q701N4 177 aa5.52□□□□□ -1.53
GTF3A-204ENST00000438571 KRTAP6-1Q3LI64 71 aa5.5□□□□□ -1.53
GTF3A-204ENST00000438571 MT1AP04731 61 aa5.47□□□□□ -1.53
GTF3A-204ENST00000438571 PRAC1Q96KF2 57 aa5.41□□□□□ -1.54
GTF3A-204ENST00000438571 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
GTF3A-204ENST00000438571 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
GTF3A-204ENST00000438571 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
GTF3A-204ENST00000438571 AHNAKQ09666 5890 aaKnown RBP5.3□□□□□ -1.56
GTF3A-204ENST00000438571 MUC5BQ9HC84 5762 aaPredicted RBP5.3□□□□□ -1.56
GTF3A-204ENST00000438571 KTN1-AS1Q86SY8 53 aa5.3□□□□□ -1.56
GTF3A-204ENST00000438571 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
GTF3A-204ENST00000438571 MUC5ACP98088 5654 aa5.27□□□□□ -1.57
GTF3A-204ENST00000438571 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
GTF3A-204ENST00000438571 KRTAP5-6Q6L8G9 129 aaPredicted RBP5□□□□□ -1.61
GTF3A-204ENST00000438571 KRTAP5-1Q6L8H4 278 aa5□□□□□ -1.61
GTF3A-204ENST00000438571 KRTAP5-11Q6L8G4 156 aa4.99□□□□□ -1.61
GTF3A-204ENST00000438571 MT3P25713 68 aa4.97□□□□□ -1.61
GTF3A-204ENST00000438571 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
GTF3A-204ENST00000438571 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
GTF3A-204ENST00000438571 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
GTF3A-204ENST00000438571 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
GTF3A-204ENST00000438571 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
GTF3A-204ENST00000438571 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
GTF3A-204ENST00000438571 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
GTF3A-204ENST00000438571 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
GTF3A-204ENST00000438571 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
GTF3A-204ENST00000438571 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
GTF3A-204ENST00000438571 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
GTF3A-204ENST00000438571 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
GTF3A-204ENST00000438571 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
GTF3A-204ENST00000438571 INE1O15225 51 aa3.29□□□□□ -1.88
GTF3A-204ENST00000438571 PRM1P04553 51 aa3.03□□□□□ -1.92
GTF3A-204ENST00000438571 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
GTF3A-204ENST00000438571 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms