RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 KRTAP12-3P60328 96 aa1.68□□□□□ -2.14
HLA-N-201ENST00000437516 MT1XP80297 61 aa1.68□□□□□ -2.14
HLA-N-201ENST00000437516 KRTAP10-12P60413 245 aa1.67□□□□□ -2.14
HLA-N-201ENST00000437516 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
HLA-N-201ENST00000437516 DSTQ03001 7570 aaKnown RBP1.65□□□□□ -2.15
HLA-N-201ENST00000437516 KRTAP10-7P60409 375 aaPredicted RBP1.64□□□□□ -2.15
HLA-N-201ENST00000437516 KRTAP9-3Q9BYQ3 159 aa1.63□□□□□ -2.15
HLA-N-201ENST00000437516 KRTAP2-2Q9BYT5 123 aa1.61□□□□□ -2.15
HLA-N-201ENST00000437516 KRTAP2-1Q9BYU5 128 aa1.61□□□□□ -2.15
HLA-N-201ENST00000437516 KRTAP19-5Q3LI72 72 aa1.59□□□□□ -2.15
HLA-N-201ENST00000437516 LCE3CQ5T5A8 94 aa1.59□□□□□ -2.15
HLA-N-201ENST00000437516 MDN1Q9NU22 5596 aa1.58□□□□□ -2.16
HLA-N-201ENST00000437516 KRTAP19-4Q3LI73 84 aa1.56□□□□□ -2.16
HLA-N-201ENST00000437516 LCE2BO14633 110 aa1.55□□□□□ -2.16
HLA-N-201ENST00000437516 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
HLA-N-201ENST00000437516 KRTAP4-8A0A0G2JLE6 195 aa1.5□□□□□ -2.17
HLA-N-201ENST00000437516 KRTAP9-6A8MVA2 160 aa1.5□□□□□ -2.17
HLA-N-201ENST00000437516 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
HLA-N-201ENST00000437516 KRTAP4-8Q9BYQ9 185 aa1.5□□□□□ -2.17
HLA-N-201ENST00000437516 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
HLA-N-201ENST00000437516 MT1LQ93083 61 aa1.47□□□□□ -2.17
HLA-N-201ENST00000437516 MT1EP04732 61 aa1.46□□□□□ -2.18
HLA-N-201ENST00000437516 KRTAP4-7Q9BYR0 210 aa1.46□□□□□ -2.18
HLA-N-201ENST00000437516 KRTAP4-2Q9BYR5 136 aa1.44□□□□□ -2.18
HLA-N-201ENST00000437516 KRTAP19-6Q3LI70 58 aa1.41□□□□□ -2.18
HLA-N-201ENST00000437516 KRTAP4-9Q9BYQ8 210 aa1.4□□□□□ -2.19
HLA-N-201ENST00000437516 KRTAP5-3Q6L8H2 238 aa1.38□□□□□ -2.19
HLA-N-201ENST00000437516 MT1GP13640 62 aa1.37□□□□□ -2.19
HLA-N-201ENST00000437516 MT1MQ8N339 61 aa1.37□□□□□ -2.19
HLA-N-201ENST00000437516 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
HLA-N-201ENST00000437516 LOC100996750A0A140TA64 210 aa1.35□□□□□ -2.19
HLA-N-201ENST00000437516 KRTAP5-4Q6L8H1 288 aa1.35□□□□□ -2.19
HLA-N-201ENST00000437516 KRTAP4-3Q9BYR4 195 aa1.35□□□□□ -2.19
HLA-N-201ENST00000437516 KRTAP5-9P26371 169 aa1.32□□□□□ -2.2
HLA-N-201ENST00000437516 KRTAP12-4P60329 112 aa1.32□□□□□ -2.2
HLA-N-201ENST00000437516 LCE5AQ5TCM9 118 aa1.3□□□□□ -2.2
HLA-N-201ENST00000437516 MT1AP04731 61 aa1.29□□□□□ -2.2
HLA-N-201ENST00000437516 LCE1DQ5T752 114 aa1.27□□□□□ -2.21
HLA-N-201ENST00000437516 LCE3BQ5TA77 95 aa1.26□□□□□ -2.21
HLA-N-201ENST00000437516 SPRR2FQ96RM1 72 aa1.25□□□□□ -2.21
HLA-N-201ENST00000437516 KRTAP6-1Q3LI64 71 aa1.24□□□□□ -2.21
HLA-N-201ENST00000437516 LCE3EQ5T5B0 92 aa1.24□□□□□ -2.21
HLA-N-201ENST00000437516 LCE3DQ9BYE3 92 aa1.23□□□□□ -2.21
HLA-N-201ENST00000437516 SPRR2EP22531 72 aa1.21□□□□□ -2.22
HLA-N-201ENST00000437516 SPRR2BP35325 72 aa1.21□□□□□ -2.22
HLA-N-201ENST00000437516 SPRR2AP35326 72 aa1.21□□□□□ -2.22
HLA-N-201ENST00000437516 KRTAP5-5Q701N2 237 aaPredicted RBP1.2□□□□□ -2.22
HLA-N-201ENST00000437516 KRTAP9-9Q9BYP9 154 aa1.19□□□□□ -2.22
HLA-N-201ENST00000437516 PRM1P04553 51 aa1.18□□□□□ -2.22
HLA-N-201ENST00000437516 SPRR2DP22532 72 aa1.18□□□□□ -2.22
HLA-N-201ENST00000437516 LCE1AQ5T7P2 110 aa1.18□□□□□ -2.22
HLA-N-201ENST00000437516 KRTAP9-4Q9BYQ2 154 aa1.18□□□□□ -2.22
HLA-N-201ENST00000437516 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
HLA-N-201ENST00000437516 MT3P25713 68 aa1.13□□□□□ -2.23
HLA-N-201ENST00000437516 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
HLA-N-201ENST00000437516 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
HLA-N-201ENST00000437516 MT4P47944 62 aa1.11□□□□□ -2.23
HLA-N-201ENST00000437516 KRTAP4-6Q9BYQ5 205 aa1.03□□□□□ -2.24
HLA-N-201ENST00000437516 KRTAP5-2Q701N4 177 aa1□□□□□ -2.25
HLA-N-201ENST00000437516 KRTAP4-11Q9BYQ6 195 aa1□□□□□ -2.25
HLA-N-201ENST00000437516 LCE4AQ5TA78 99 aa0.99□□□□□ -2.25
HLA-N-201ENST00000437516 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
HLA-N-201ENST00000437516 KRTAP20-2Q3LI61 65 aa0.97□□□□□ -2.25
HLA-N-201ENST00000437516 KRTAP4-4Q9BYR3 166 aa0.93□□□□□ -2.26
HLA-N-201ENST00000437516 LCE1EQ5T753 118 aa0.91□□□□□ -2.26
HLA-N-201ENST00000437516 OBSCNQ5VST9 7968 aa0.91□□□□□ -2.26
HLA-N-201ENST00000437516 KRTAP5-1Q6L8H4 278 aa0.88□□□□□ -2.27
HLA-N-201ENST00000437516 LCE1BQ5T7P3 118 aa0.87□□□□□ -2.27
HLA-N-201ENST00000437516 LCE1CQ5T751 118 aa0.85□□□□□ -2.27
HLA-N-201ENST00000437516 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.81□□□□□ -2.28
HLA-N-201ENST00000437516 KRTAP21-2Q3LI59 83 aa0.8□□□□□ -2.28
HLA-N-201ENST00000437516 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
HLA-N-201ENST00000437516 KRTAP5-11Q6L8G4 156 aa0.73□□□□□ -2.29
HLA-N-201ENST00000437516 KRTAP4-12Q9BQ66 201 aa0.68□□□□□ -2.3
HLA-N-201ENST00000437516 LCE1FQ5T754 118 aa0.6□□□□□ -2.31
HLA-N-201ENST00000437516 MUC19Q7Z5P9 8384 aa0.59□□□□□ -2.32
HLA-N-201ENST00000437516 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 402.6 ms