RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
RPE-208ENST00000436630 SYNE2Q8WXH0 6885 aaKnown RBP5.14□□□□□ -1.59
RPE-208ENST00000436630 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
RPE-208ENST00000436630 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
RPE-208ENST00000436630 KMT2DO14686 5537 aa5.06□□□□□ -1.6
RPE-208ENST00000436630 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
RPE-208ENST00000436630 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
RPE-208ENST00000436630 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
RPE-208ENST00000436630 H3BS24 57 aa4.99□□□□□ -1.61
RPE-208ENST00000436630 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
RPE-208ENST00000436630 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
RPE-208ENST00000436630 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
RPE-208ENST00000436630 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
RPE-208ENST00000436630 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
RPE-208ENST00000436630 MT1EP04732 61 aa4.94□□□□□ -1.62
RPE-208ENST00000436630 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
RPE-208ENST00000436630 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
RPE-208ENST00000436630 NEBP20929 6669 aa4.83□□□□□ -1.64
RPE-208ENST00000436630 SPRR2EP22531 72 aa4.83□□□□□ -1.64
RPE-208ENST00000436630 SPRR2BP35325 72 aa4.83□□□□□ -1.64
RPE-208ENST00000436630 SPRR2AP35326 72 aa4.83□□□□□ -1.64
RPE-208ENST00000436630 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
RPE-208ENST00000436630 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
RPE-208ENST00000436630 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
RPE-208ENST00000436630 MT1LQ93083 61 aa4.8□□□□□ -1.64
RPE-208ENST00000436630 MT1GP13640 62 aa4.75□□□□□ -1.65
RPE-208ENST00000436630 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
RPE-208ENST00000436630 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
RPE-208ENST00000436630 SPRR2DP22532 72 aa4.67□□□□□ -1.66
RPE-208ENST00000436630 MT1MQ8N339 61 aa4.66□□□□□ -1.66
RPE-208ENST00000436630 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
RPE-208ENST00000436630 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
RPE-208ENST00000436630 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
RPE-208ENST00000436630 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
RPE-208ENST00000436630 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
RPE-208ENST00000436630 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
RPE-208ENST00000436630 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
RPE-208ENST00000436630 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
RPE-208ENST00000436630 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
RPE-208ENST00000436630 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
RPE-208ENST00000436630 MT1AP04731 61 aa4.11□□□□□ -1.75
RPE-208ENST00000436630 MT4P47944 62 aa4.08□□□□□ -1.76
RPE-208ENST00000436630 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
RPE-208ENST00000436630 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
RPE-208ENST00000436630 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
RPE-208ENST00000436630 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
RPE-208ENST00000436630 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
RPE-208ENST00000436630 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
RPE-208ENST00000436630 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
RPE-208ENST00000436630 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
RPE-208ENST00000436630 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
RPE-208ENST00000436630 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
RPE-208ENST00000436630 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
RPE-208ENST00000436630 MT3P25713 68 aa3.74□□□□□ -1.81
RPE-208ENST00000436630 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
RPE-208ENST00000436630 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
RPE-208ENST00000436630 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
RPE-208ENST00000436630 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
RPE-208ENST00000436630 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
RPE-208ENST00000436630 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
RPE-208ENST00000436630 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
RPE-208ENST00000436630 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
RPE-208ENST00000436630 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
RPE-208ENST00000436630 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
RPE-208ENST00000436630 INE1O15225 51 aa3.25□□□□□ -1.89
RPE-208ENST00000436630 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
RPE-208ENST00000436630 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
RPE-208ENST00000436630 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
RPE-208ENST00000436630 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
RPE-208ENST00000436630 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
RPE-208ENST00000436630 PRM1P04553 51 aa2.77□□□□□ -1.97
RPE-208ENST00000436630 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
RPE-208ENST00000436630 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
RPE-208ENST00000436630 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
RPE-208ENST00000436630 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
RPE-208ENST00000436630 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
RPE-208ENST00000436630 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 37.7 ms