RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
HMGCL-204ENST00000436439 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
HMGCL-204ENST00000436439 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
HMGCL-204ENST00000436439 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
HMGCL-204ENST00000436439 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
HMGCL-204ENST00000436439 TNP1P09430 55 aa4.41□□□□□ -1.7
HMGCL-204ENST00000436439 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
HMGCL-204ENST00000436439 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
HMGCL-204ENST00000436439 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
HMGCL-204ENST00000436439 SPRR2DP22532 72 aa4.34□□□□□ -1.71
HMGCL-204ENST00000436439 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
HMGCL-204ENST00000436439 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
HMGCL-204ENST00000436439 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
HMGCL-204ENST00000436439 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
HMGCL-204ENST00000436439 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
HMGCL-204ENST00000436439 KRTAP15-1Q3LI76 137 aa4.24□□□□□ -1.73
HMGCL-204ENST00000436439 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
HMGCL-204ENST00000436439 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
HMGCL-204ENST00000436439 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
HMGCL-204ENST00000436439 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
HMGCL-204ENST00000436439 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
HMGCL-204ENST00000436439 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
HMGCL-204ENST00000436439 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
HMGCL-204ENST00000436439 LCE5AQ5TCM9 118 aa4.03□□□□□ -1.76
HMGCL-204ENST00000436439 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
HMGCL-204ENST00000436439 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
HMGCL-204ENST00000436439 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
HMGCL-204ENST00000436439 MT1EP04732 61 aa4.01□□□□□ -1.77
HMGCL-204ENST00000436439 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
HMGCL-204ENST00000436439 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
HMGCL-204ENST00000436439 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
HMGCL-204ENST00000436439 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
HMGCL-204ENST00000436439 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.79
HMGCL-204ENST00000436439 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
HMGCL-204ENST00000436439 MT1GP13640 62 aa3.87□□□□□ -1.79
HMGCL-204ENST00000436439 MT1LQ93083 61 aa3.86□□□□□ -1.79
HMGCL-204ENST00000436439 MT4P47944 62 aa3.83□□□□□ -1.8
HMGCL-204ENST00000436439 MT1MQ8N339 61 aa3.83□□□□□ -1.8
HMGCL-204ENST00000436439 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
HMGCL-204ENST00000436439 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
HMGCL-204ENST00000436439 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
HMGCL-204ENST00000436439 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
HMGCL-204ENST00000436439 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
HMGCL-204ENST00000436439 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
HMGCL-204ENST00000436439 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
HMGCL-204ENST00000436439 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
HMGCL-204ENST00000436439 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
HMGCL-204ENST00000436439 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
HMGCL-204ENST00000436439 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
HMGCL-204ENST00000436439 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
HMGCL-204ENST00000436439 INE1O15225 51 aa3.35□□□□□ -1.87
HMGCL-204ENST00000436439 MT1AP04731 61 aa3.29□□□□□ -1.88
HMGCL-204ENST00000436439 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
HMGCL-204ENST00000436439 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
HMGCL-204ENST00000436439 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
HMGCL-204ENST00000436439 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
HMGCL-204ENST00000436439 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
HMGCL-204ENST00000436439 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
HMGCL-204ENST00000436439 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
HMGCL-204ENST00000436439 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
HMGCL-204ENST00000436439 MT3P25713 68 aa2.99□□□□□ -1.93
HMGCL-204ENST00000436439 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
HMGCL-204ENST00000436439 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
HMGCL-204ENST00000436439 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
HMGCL-204ENST00000436439 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
HMGCL-204ENST00000436439 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
HMGCL-204ENST00000436439 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
HMGCL-204ENST00000436439 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
HMGCL-204ENST00000436439 LCE1FQ5T754 118 aa2.57□□□□□ -2
HMGCL-204ENST00000436439 LCE1CQ5T751 118 aa2.54□□□□□ -2
HMGCL-204ENST00000436439 PRM1P04553 51 aa2.52□□□□□ -2.01
HMGCL-204ENST00000436439 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
HMGCL-204ENST00000436439 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
HMGCL-204ENST00000436439 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
HMGCL-204ENST00000436439 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
HMGCL-204ENST00000436439 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
HMGCL-204ENST00000436439 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 80.7 ms