RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PRO0628Q9UI54 55 aa7.23□□□□□ -1.25
HLA-F-220ENST00000434407 KRTAP15-1Q3LI76 137 aa7.18□□□□□ -1.26
HLA-F-220ENST00000434407 SPRR2EP22531 72 aa7.08□□□□□ -1.28
HLA-F-220ENST00000434407 SPRR2BP35325 72 aa7.08□□□□□ -1.28
HLA-F-220ENST00000434407 SPRR2AP35326 72 aa7.08□□□□□ -1.28
HLA-F-220ENST00000434407 LCE1AQ5T7P2 110 aa7.07□□□□□ -1.28
HLA-F-220ENST00000434407 PMAIP1Q13794 54 aa7.06□□□□□ -1.28
HLA-F-220ENST00000434407 KRTAP20-1Q3LI63 56 aa6.99□□□□□ -1.29
HLA-F-220ENST00000434407 C10orf95Q9H7T3 257 aa6.93□□□□□ -1.3
HLA-F-220ENST00000434407 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
HLA-F-220ENST00000434407 KRTAP2-3P0C7H8 128 aa6.9□□□□□ -1.3
HLA-F-220ENST00000434407 ROMO1P60602 79 aa6.9□□□□□ -1.3
HLA-F-220ENST00000434407 KRTAP2-4Q9BYR9 128 aa6.9□□□□□ -1.3
HLA-F-220ENST00000434407 KRTAP23-1A1A580 65 aa6.89□□□□□ -1.31
HLA-F-220ENST00000434407 SPRR2DP22532 72 aa6.84□□□□□ -1.31
HLA-F-220ENST00000434407 MT1EP04732 61 aa6.83□□□□□ -1.32
HLA-F-220ENST00000434407 TNP1P09430 55 aa6.83□□□□□ -1.32
HLA-F-220ENST00000434407 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.33
HLA-F-220ENST00000434407 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
HLA-F-220ENST00000434407 KRTAP19-3Q7Z4W3 81 aa6.72□□□□□ -1.33
HLA-F-220ENST00000434407 KTN1-AS1Q86SY8 53 aa6.7□□□□□ -1.34
HLA-F-220ENST00000434407 KRTAP2-2Q9BYT5 123 aa6.7□□□□□ -1.34
HLA-F-220ENST00000434407 KRTAP2-1Q9BYU5 128 aa6.7□□□□□ -1.34
HLA-F-220ENST00000434407 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
HLA-F-220ENST00000434407 MT1GP13640 62 aa6.59□□□□□ -1.35
HLA-F-220ENST00000434407 PRAC1Q96KF2 57 aa6.59□□□□□ -1.35
HLA-F-220ENST00000434407 MT1LQ93083 61 aa6.57□□□□□ -1.36
HLA-F-220ENST00000434407 PP632Q6XCG6 107 aa6.5□□□□□ -1.37
HLA-F-220ENST00000434407 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.49□□□□□ -1.37
HLA-F-220ENST00000434407 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
HLA-F-220ENST00000434407 MT1MQ8N339 61 aa6.48□□□□□ -1.37
HLA-F-220ENST00000434407 DSTQ03001 7570 aaKnown RBP6.45□□□□□ -1.38
HLA-F-220ENST00000434407 SVIPQ8NHG7 77 aa6.34□□□□□ -1.39
HLA-F-220ENST00000434407 KRTAP5-11Q6L8G4 156 aa6.32□□□□□ -1.4
HLA-F-220ENST00000434407 KRTAP4-3Q9BYR4 195 aa6.29□□□□□ -1.4
HLA-F-220ENST00000434407 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
HLA-F-220ENST00000434407 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
HLA-F-220ENST00000434407 LCE1EQ5T753 118 aa6□□□□□ -1.45
HLA-F-220ENST00000434407 KRTAP5-5Q701N2 237 aaPredicted RBP5.96□□□□□ -1.46
HLA-F-220ENST00000434407 MT4P47944 62 aa5.95□□□□□ -1.46
HLA-F-220ENST00000434407 HMCN1Q96RW7 5635 aa5.95□□□□□ -1.46
HLA-F-220ENST00000434407 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
HLA-F-220ENST00000434407 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
HLA-F-220ENST00000434407 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
HLA-F-220ENST00000434407 KRTAP20-2Q3LI61 65 aa5.68□□□□□ -1.5
HLA-F-220ENST00000434407 GPR98Q8WXG9 6306 aa5.68□□□□□ -1.5
HLA-F-220ENST00000434407 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
HLA-F-220ENST00000434407 KRTAP5-1Q6L8H4 278 aa5.61□□□□□ -1.51
HLA-F-220ENST00000434407 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
HLA-F-220ENST00000434407 MT1AP04731 61 aa5.59□□□□□ -1.51
HLA-F-220ENST00000434407 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
HLA-F-220ENST00000434407 KRTAP5-10Q6L8G5 202 aa5.51□□□□□ -1.53
HLA-F-220ENST00000434407 MT3P25713 68 aa5.44□□□□□ -1.54
HLA-F-220ENST00000434407 LUZP6Q538Z0 58 aa5.44□□□□□ -1.54
HLA-F-220ENST00000434407 KRTAP4-4Q9BYR3 166 aa5.39□□□□□ -1.55
HLA-F-220ENST00000434407 KRTAP5-2Q701N4 177 aa5.37□□□□□ -1.55
HLA-F-220ENST00000434407 KRTAP5-7Q6L8G8 165 aa5.26□□□□□ -1.57
HLA-F-220ENST00000434407 KRTAP6-2Q3LI66 62 aa5.23□□□□□ -1.57
HLA-F-220ENST00000434407 NDUFAF8A1L188 74 aa5.19□□□□□ -1.58
HLA-F-220ENST00000434407 KRTAP5-8O75690 187 aa4.96□□□□□ -1.62
HLA-F-220ENST00000434407 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
HLA-F-220ENST00000434407 LCE1FQ5T754 118 aa4.72□□□□□ -1.65
HLA-F-220ENST00000434407 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
HLA-F-220ENST00000434407 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
HLA-F-220ENST00000434407 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
HLA-F-220ENST00000434407 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
HLA-F-220ENST00000434407 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
HLA-F-220ENST00000434407 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
HLA-F-220ENST00000434407 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
HLA-F-220ENST00000434407 INE1O15225 51 aa4.31□□□□□ -1.72
HLA-F-220ENST00000434407 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
HLA-F-220ENST00000434407 KRTAP21-2Q3LI59 83 aa3.66□□□□□ -1.82
HLA-F-220ENST00000434407 PRM1P04553 51 aa3.58□□□□□ -1.84
HLA-F-220ENST00000434407 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
HLA-F-220ENST00000434407 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
HLA-F-220ENST00000434407 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
HLA-F-220ENST00000434407 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms