RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 M0R2T5 61 aa3.8□□□□□ -1.8
GABPB1-205ENST00000429662 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
GABPB1-205ENST00000429662 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
GABPB1-205ENST00000429662 KRTAP19-6Q3LI70 58 aa3.78□□□□□ -1.8
GABPB1-205ENST00000429662 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
GABPB1-205ENST00000429662 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
GABPB1-205ENST00000429662 MT2AP02795 61 aa3.75□□□□□ -1.81
GABPB1-205ENST00000429662 MT1FP04733 61 aa3.74□□□□□ -1.81
GABPB1-205ENST00000429662 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
GABPB1-205ENST00000429662 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
GABPB1-205ENST00000429662 KMT2DO14686 5537 aa3.7□□□□□ -1.82
GABPB1-205ENST00000429662 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.82
GABPB1-205ENST00000429662 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
GABPB1-205ENST00000429662 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
GABPB1-205ENST00000429662 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
GABPB1-205ENST00000429662 KRTAP19-8Q3LI54 63 aa3.58□□□□□ -1.84
GABPB1-205ENST00000429662 KRTAP10-10P60014 251 aa3.57□□□□□ -1.84
GABPB1-205ENST00000429662 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
GABPB1-205ENST00000429662 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
GABPB1-205ENST00000429662 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
GABPB1-205ENST00000429662 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
GABPB1-205ENST00000429662 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
GABPB1-205ENST00000429662 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
GABPB1-205ENST00000429662 MT1BP07438 61 aa3.45□□□□□ -1.86
GABPB1-205ENST00000429662 MT3P25713 68 aa3.44□□□□□ -1.86
GABPB1-205ENST00000429662 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
GABPB1-205ENST00000429662 MT1XP80297 61 aa3.43□□□□□ -1.86
GABPB1-205ENST00000429662 PRO2289Q9P1D8 64 aa3.43□□□□□ -1.86
GABPB1-205ENST00000429662 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
GABPB1-205ENST00000429662 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
GABPB1-205ENST00000429662 KRTAP12-3P60328 96 aa3.4□□□□□ -1.86
GABPB1-205ENST00000429662 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.88
GABPB1-205ENST00000429662 INE1O15225 51 aa3.33□□□□□ -1.88
GABPB1-205ENST00000429662 SPRR2EP22531 72 aa3.31□□□□□ -1.88
GABPB1-205ENST00000429662 SPRR2BP35325 72 aa3.31□□□□□ -1.88
GABPB1-205ENST00000429662 SPRR2AP35326 72 aa3.31□□□□□ -1.88
GABPB1-205ENST00000429662 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
GABPB1-205ENST00000429662 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
GABPB1-205ENST00000429662 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
GABPB1-205ENST00000429662 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
GABPB1-205ENST00000429662 SPRR2DP22532 72 aa3.19□□□□□ -1.9
GABPB1-205ENST00000429662 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
GABPB1-205ENST00000429662 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
GABPB1-205ENST00000429662 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
GABPB1-205ENST00000429662 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
GABPB1-205ENST00000429662 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
GABPB1-205ENST00000429662 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
GABPB1-205ENST00000429662 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
GABPB1-205ENST00000429662 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
GABPB1-205ENST00000429662 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
GABPB1-205ENST00000429662 MT1EP04732 61 aa3□□□□□ -1.93
GABPB1-205ENST00000429662 MT1LQ93083 61 aa3□□□□□ -1.93
GABPB1-205ENST00000429662 MT1GP13640 62 aa2.85□□□□□ -1.95
GABPB1-205ENST00000429662 MT4P47944 62 aa2.85□□□□□ -1.95
GABPB1-205ENST00000429662 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
GABPB1-205ENST00000429662 MT1MQ8N339 61 aa2.79□□□□□ -1.96
GABPB1-205ENST00000429662 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
GABPB1-205ENST00000429662 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
GABPB1-205ENST00000429662 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
GABPB1-205ENST00000429662 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
GABPB1-205ENST00000429662 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
GABPB1-205ENST00000429662 MT1AP04731 61 aa2.62□□□□□ -1.99
GABPB1-205ENST00000429662 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
GABPB1-205ENST00000429662 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
GABPB1-205ENST00000429662 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
GABPB1-205ENST00000429662 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
GABPB1-205ENST00000429662 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
GABPB1-205ENST00000429662 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
GABPB1-205ENST00000429662 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
GABPB1-205ENST00000429662 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
GABPB1-205ENST00000429662 PRM1P04553 51 aa2.3□□□□□ -2.04
GABPB1-205ENST00000429662 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
GABPB1-205ENST00000429662 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
GABPB1-205ENST00000429662 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
GABPB1-205ENST00000429662 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
GABPB1-205ENST00000429662 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
GABPB1-205ENST00000429662 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms