RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 KTN1-AS1Q86SY8 53 aa4.91□□□□□ -1.62
HLA-F-219ENST00000429294 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
HLA-F-219ENST00000429294 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
HLA-F-219ENST00000429294 MT1EP04732 61 aa4.88□□□□□ -1.63
HLA-F-219ENST00000429294 A0A0D9SG42 100 aa4.83□□□□□ -1.64
HLA-F-219ENST00000429294 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
HLA-F-219ENST00000429294 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
HLA-F-219ENST00000429294 MT1GP13640 62 aa4.8□□□□□ -1.64
HLA-F-219ENST00000429294 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
HLA-F-219ENST00000429294 MT4P47944 62 aa4.77□□□□□ -1.65
HLA-F-219ENST00000429294 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
HLA-F-219ENST00000429294 HMCN1Q96RW7 5635 aa4.76□□□□□ -1.65
HLA-F-219ENST00000429294 ROMO1P60602 79 aa4.74□□□□□ -1.65
HLA-F-219ENST00000429294 SPINT4Q6UDR6 99 aa4.74□□□□□ -1.65
HLA-F-219ENST00000429294 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
HLA-F-219ENST00000429294 MT1MQ8N339 61 aa4.68□□□□□ -1.66
HLA-F-219ENST00000429294 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
HLA-F-219ENST00000429294 MT1LQ93083 61 aa4.62□□□□□ -1.67
HLA-F-219ENST00000429294 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
HLA-F-219ENST00000429294 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
HLA-F-219ENST00000429294 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
HLA-F-219ENST00000429294 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
HLA-F-219ENST00000429294 KRTAP4-6Q9BYQ5 205 aa4.57□□□□□ -1.68
HLA-F-219ENST00000429294 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
HLA-F-219ENST00000429294 C10orf95Q9H7T3 257 aa4.52□□□□□ -1.69
HLA-F-219ENST00000429294 TNP1P09430 55 aa4.5□□□□□ -1.69
HLA-F-219ENST00000429294 LCE3AQ5TA76 89 aa4.49□□□□□ -1.69
HLA-F-219ENST00000429294 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
HLA-F-219ENST00000429294 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
HLA-F-219ENST00000429294 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
HLA-F-219ENST00000429294 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
HLA-F-219ENST00000429294 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
HLA-F-219ENST00000429294 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
HLA-F-219ENST00000429294 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
HLA-F-219ENST00000429294 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
HLA-F-219ENST00000429294 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
HLA-F-219ENST00000429294 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
HLA-F-219ENST00000429294 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
HLA-F-219ENST00000429294 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
HLA-F-219ENST00000429294 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
HLA-F-219ENST00000429294 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
HLA-F-219ENST00000429294 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
HLA-F-219ENST00000429294 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
HLA-F-219ENST00000429294 MT1AP04731 61 aa3.94□□□□□ -1.78
HLA-F-219ENST00000429294 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
HLA-F-219ENST00000429294 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
HLA-F-219ENST00000429294 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
HLA-F-219ENST00000429294 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.79
HLA-F-219ENST00000429294 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
HLA-F-219ENST00000429294 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
HLA-F-219ENST00000429294 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
HLA-F-219ENST00000429294 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
HLA-F-219ENST00000429294 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
HLA-F-219ENST00000429294 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
HLA-F-219ENST00000429294 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
HLA-F-219ENST00000429294 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
HLA-F-219ENST00000429294 MT3P25713 68 aa3.65□□□□□ -1.83
HLA-F-219ENST00000429294 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
HLA-F-219ENST00000429294 H3BS24 57 aa3.53□□□□□ -1.84
HLA-F-219ENST00000429294 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
HLA-F-219ENST00000429294 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
HLA-F-219ENST00000429294 INE1O15225 51 aa3.25□□□□□ -1.89
HLA-F-219ENST00000429294 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
HLA-F-219ENST00000429294 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
HLA-F-219ENST00000429294 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
HLA-F-219ENST00000429294 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
HLA-F-219ENST00000429294 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
HLA-F-219ENST00000429294 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
HLA-F-219ENST00000429294 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
HLA-F-219ENST00000429294 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
HLA-F-219ENST00000429294 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
HLA-F-219ENST00000429294 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
HLA-F-219ENST00000429294 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
HLA-F-219ENST00000429294 PRM1P04553 51 aa2.43□□□□□ -2.02
HLA-F-219ENST00000429294 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
HLA-F-219ENST00000429294 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
HLA-F-219ENST00000429294 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
HLA-F-219ENST00000429294 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 86.8 ms