RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
ALMS1P1-201ENST00000428767 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
ALMS1P1-201ENST00000428767 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
ALMS1P1-201ENST00000428767 UQCR11O14957 56 aa4.62□□□□□ -1.67
ALMS1P1-201ENST00000428767 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
ALMS1P1-201ENST00000428767 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
ALMS1P1-201ENST00000428767 A6NED7 52 aa4.57□□□□□ -1.68
ALMS1P1-201ENST00000428767 A0A0D9SG42 100 aa4.56□□□□□ -1.68
ALMS1P1-201ENST00000428767 A8MU10 97 aa4.56□□□□□ -1.68
ALMS1P1-201ENST00000428767 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
ALMS1P1-201ENST00000428767 MT4P47944 62 aa4.55□□□□□ -1.68
ALMS1P1-201ENST00000428767 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
ALMS1P1-201ENST00000428767 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
ALMS1P1-201ENST00000428767 KRTAP12-1P59990 96 aa4.48□□□□□ -1.69
ALMS1P1-201ENST00000428767 SPINT4Q6UDR6 99 aa4.47□□□□□ -1.69
ALMS1P1-201ENST00000428767 CDC42SE1Q9NRR8 79 aa4.46□□□□□ -1.7
ALMS1P1-201ENST00000428767 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
ALMS1P1-201ENST00000428767 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
ALMS1P1-201ENST00000428767 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
ALMS1P1-201ENST00000428767 CAMK2N1Q7Z7J9 78 aa4.39□□□□□ -1.71
ALMS1P1-201ENST00000428767 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
ALMS1P1-201ENST00000428767 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
ALMS1P1-201ENST00000428767 K7ERS5 55 aa4.38□□□□□ -1.71
ALMS1P1-201ENST00000428767 MT1EP04732 61 aa4.34□□□□□ -1.71
ALMS1P1-201ENST00000428767 KRTAP19-7Q3SYF9 63 aa4.34□□□□□ -1.71
ALMS1P1-201ENST00000428767 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
ALMS1P1-201ENST00000428767 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
ALMS1P1-201ENST00000428767 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
ALMS1P1-201ENST00000428767 MT1GP13640 62 aa4.21□□□□□ -1.74
ALMS1P1-201ENST00000428767 PP632Q6XCG6 107 aa4.19□□□□□ -1.74
ALMS1P1-201ENST00000428767 ROMO1P60602 79 aa4.18□□□□□ -1.74
ALMS1P1-201ENST00000428767 MT1MQ8N339 61 aa4.18□□□□□ -1.74
ALMS1P1-201ENST00000428767 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
ALMS1P1-201ENST00000428767 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
ALMS1P1-201ENST00000428767 TNP1P09430 55 aa4.14□□□□□ -1.75
ALMS1P1-201ENST00000428767 KRTAP19-5Q3LI72 72 aa4.12□□□□□ -1.75
ALMS1P1-201ENST00000428767 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
ALMS1P1-201ENST00000428767 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
ALMS1P1-201ENST00000428767 MT1LQ93083 61 aa4.06□□□□□ -1.76
ALMS1P1-201ENST00000428767 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
ALMS1P1-201ENST00000428767 LCE3AQ5TA76 89 aa4□□□□□ -1.77
ALMS1P1-201ENST00000428767 AHNAKQ09666 5890 aaKnown RBP4□□□□□ -1.77
ALMS1P1-201ENST00000428767 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
ALMS1P1-201ENST00000428767 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
ALMS1P1-201ENST00000428767 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
ALMS1P1-201ENST00000428767 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
ALMS1P1-201ENST00000428767 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
ALMS1P1-201ENST00000428767 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
ALMS1P1-201ENST00000428767 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
ALMS1P1-201ENST00000428767 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
ALMS1P1-201ENST00000428767 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
ALMS1P1-201ENST00000428767 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
ALMS1P1-201ENST00000428767 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
ALMS1P1-201ENST00000428767 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
ALMS1P1-201ENST00000428767 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
ALMS1P1-201ENST00000428767 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
ALMS1P1-201ENST00000428767 MT1AP04731 61 aa3.44□□□□□ -1.86
ALMS1P1-201ENST00000428767 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
ALMS1P1-201ENST00000428767 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
ALMS1P1-201ENST00000428767 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
ALMS1P1-201ENST00000428767 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
ALMS1P1-201ENST00000428767 MT3P25713 68 aa3.33□□□□□ -1.88
ALMS1P1-201ENST00000428767 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
ALMS1P1-201ENST00000428767 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
ALMS1P1-201ENST00000428767 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
ALMS1P1-201ENST00000428767 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
ALMS1P1-201ENST00000428767 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
ALMS1P1-201ENST00000428767 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
ALMS1P1-201ENST00000428767 INE1O15225 51 aa2.74□□□□□ -1.97
ALMS1P1-201ENST00000428767 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
ALMS1P1-201ENST00000428767 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
ALMS1P1-201ENST00000428767 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
ALMS1P1-201ENST00000428767 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
ALMS1P1-201ENST00000428767 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
ALMS1P1-201ENST00000428767 PRM1P04553 51 aa2.16□□□□□ -2.06
ALMS1P1-201ENST00000428767 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
ALMS1P1-201ENST00000428767 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 39 ms