RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 CDC42SE1Q9NRR8 79 aa6.45□□□□□ -1.38
MMP11-202ENST00000428253 MT1GP13640 62 aa6.4□□□□□ -1.38
MMP11-202ENST00000428253 MT1LQ93083 61 aa6.4□□□□□ -1.38
MMP11-202ENST00000428253 KRTAP2-2Q9BYT5 123 aa6.4□□□□□ -1.38
MMP11-202ENST00000428253 KRTAP2-1Q9BYU5 128 aa6.4□□□□□ -1.38
MMP11-202ENST00000428253 LCE3BQ5TA77 95 aa6.38□□□□□ -1.39
MMP11-202ENST00000428253 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
MMP11-202ENST00000428253 KRTAP23-1A1A580 65 aa6.31□□□□□ -1.4
MMP11-202ENST00000428253 MT1MQ8N339 61 aa6.3□□□□□ -1.4
MMP11-202ENST00000428253 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
MMP11-202ENST00000428253 ROMO1P60602 79 aa6.27□□□□□ -1.41
MMP11-202ENST00000428253 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
MMP11-202ENST00000428253 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
MMP11-202ENST00000428253 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
MMP11-202ENST00000428253 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
MMP11-202ENST00000428253 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
MMP11-202ENST00000428253 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
MMP11-202ENST00000428253 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
MMP11-202ENST00000428253 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
MMP11-202ENST00000428253 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
MMP11-202ENST00000428253 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
MMP11-202ENST00000428253 KRTAP5-5Q701N2 237 aaPredicted RBP5.79□□□□□ -1.48
MMP11-202ENST00000428253 LCE1DQ5T752 114 aa5.78□□□□□ -1.48
MMP11-202ENST00000428253 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
MMP11-202ENST00000428253 MT4P47944 62 aa5.71□□□□□ -1.5
MMP11-202ENST00000428253 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
MMP11-202ENST00000428253 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.5
MMP11-202ENST00000428253 HMCN1Q96RW7 5635 aa5.62□□□□□ -1.51
MMP11-202ENST00000428253 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
MMP11-202ENST00000428253 PRO0628Q9UI54 55 aa5.53□□□□□ -1.52
MMP11-202ENST00000428253 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
MMP11-202ENST00000428253 KRTAP12-4P60329 112 aa5.48□□□□□ -1.53
MMP11-202ENST00000428253 KRTAP20-2Q3LI61 65 aa5.48□□□□□ -1.53
MMP11-202ENST00000428253 MT1AP04731 61 aa5.45□□□□□ -1.54
MMP11-202ENST00000428253 SYNE1Q8NF91 8797 aaKnown RBP5.44□□□□□ -1.54
MMP11-202ENST00000428253 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
MMP11-202ENST00000428253 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
MMP11-202ENST00000428253 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
MMP11-202ENST00000428253 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
MMP11-202ENST00000428253 GPR98Q8WXG9 6306 aa5.3□□□□□ -1.56
MMP11-202ENST00000428253 KRTAP5-10Q6L8G5 202 aa5.24□□□□□ -1.57
MMP11-202ENST00000428253 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
MMP11-202ENST00000428253 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
MMP11-202ENST00000428253 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
MMP11-202ENST00000428253 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
MMP11-202ENST00000428253 KRTAP5-7Q6L8G8 165 aa5□□□□□ -1.61
MMP11-202ENST00000428253 SVIPQ8NHG7 77 aa4.97□□□□□ -1.61
MMP11-202ENST00000428253 MT3P25713 68 aa4.95□□□□□ -1.62
MMP11-202ENST00000428253 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
MMP11-202ENST00000428253 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
MMP11-202ENST00000428253 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
MMP11-202ENST00000428253 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
MMP11-202ENST00000428253 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
MMP11-202ENST00000428253 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
MMP11-202ENST00000428253 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
MMP11-202ENST00000428253 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
MMP11-202ENST00000428253 MUC5BQ9HC84 5762 aaPredicted RBP4.3□□□□□ -1.72
MMP11-202ENST00000428253 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
MMP11-202ENST00000428253 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
MMP11-202ENST00000428253 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
MMP11-202ENST00000428253 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
MMP11-202ENST00000428253 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
MMP11-202ENST00000428253 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
MMP11-202ENST00000428253 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
MMP11-202ENST00000428253 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
MMP11-202ENST00000428253 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
MMP11-202ENST00000428253 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
MMP11-202ENST00000428253 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
MMP11-202ENST00000428253 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
MMP11-202ENST00000428253 H3BS24 57 aa3.33□□□□□ -1.88
MMP11-202ENST00000428253 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
MMP11-202ENST00000428253 PRM1P04553 51 aa3.22□□□□□ -1.89
MMP11-202ENST00000428253 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
MMP11-202ENST00000428253 INE1O15225 51 aa3.17□□□□□ -1.9
MMP11-202ENST00000428253 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
MMP11-202ENST00000428253 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
MMP11-202ENST00000428253 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
MMP11-202ENST00000428253 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 54.2 ms