RNA–Protein interactions for RNA: ENST00000428020.5

TMEM40-203, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM40, Length 431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-203ENST00000428020 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
TMEM40-203ENST00000428020 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
TMEM40-203ENST00000428020 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
TMEM40-203ENST00000428020 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
TMEM40-203ENST00000428020 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
TMEM40-203ENST00000428020 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
TMEM40-203ENST00000428020 KRTAP19-7Q3SYF9 63 aa3.79□□□□□ -1.8
TMEM40-203ENST00000428020 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
TMEM40-203ENST00000428020 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
TMEM40-203ENST00000428020 MT1EP04732 61 aa3.76□□□□□ -1.81
TMEM40-203ENST00000428020 SPRR2DP22532 72 aa3.74□□□□□ -1.81
TMEM40-203ENST00000428020 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
TMEM40-203ENST00000428020 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
TMEM40-203ENST00000428020 SVIPQ8NHG7 77 aa3.68□□□□□ -1.82
TMEM40-203ENST00000428020 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
TMEM40-203ENST00000428020 MT1LQ93083 61 aa3.66□□□□□ -1.82
TMEM40-203ENST00000428020 LCE3BQ5TA77 95 aa3.65□□□□□ -1.83
TMEM40-203ENST00000428020 MT1GP13640 62 aa3.62□□□□□ -1.83
TMEM40-203ENST00000428020 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.83
TMEM40-203ENST00000428020 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
TMEM40-203ENST00000428020 MT1MQ8N339 61 aa3.55□□□□□ -1.84
TMEM40-203ENST00000428020 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
TMEM40-203ENST00000428020 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
TMEM40-203ENST00000428020 KRTAP4-7Q9BYR0 210 aa3.5□□□□□ -1.85
TMEM40-203ENST00000428020 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
TMEM40-203ENST00000428020 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
TMEM40-203ENST00000428020 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
TMEM40-203ENST00000428020 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
TMEM40-203ENST00000428020 MT4P47944 62 aa3.31□□□□□ -1.88
TMEM40-203ENST00000428020 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
TMEM40-203ENST00000428020 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
TMEM40-203ENST00000428020 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
TMEM40-203ENST00000428020 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
TMEM40-203ENST00000428020 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
TMEM40-203ENST00000428020 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
TMEM40-203ENST00000428020 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
TMEM40-203ENST00000428020 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
TMEM40-203ENST00000428020 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
TMEM40-203ENST00000428020 MT1AP04731 61 aa3.13□□□□□ -1.91
TMEM40-203ENST00000428020 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
TMEM40-203ENST00000428020 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
TMEM40-203ENST00000428020 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
TMEM40-203ENST00000428020 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
TMEM40-203ENST00000428020 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
TMEM40-203ENST00000428020 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
TMEM40-203ENST00000428020 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
TMEM40-203ENST00000428020 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
TMEM40-203ENST00000428020 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
TMEM40-203ENST00000428020 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
TMEM40-203ENST00000428020 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
TMEM40-203ENST00000428020 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
TMEM40-203ENST00000428020 MT3P25713 68 aa2.86□□□□□ -1.95
TMEM40-203ENST00000428020 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
TMEM40-203ENST00000428020 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.96
TMEM40-203ENST00000428020 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
TMEM40-203ENST00000428020 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
TMEM40-203ENST00000428020 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
TMEM40-203ENST00000428020 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
TMEM40-203ENST00000428020 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
TMEM40-203ENST00000428020 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
TMEM40-203ENST00000428020 A0A0A0MQY5 61 aa2.59□□□□□ -1.99
TMEM40-203ENST00000428020 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
TMEM40-203ENST00000428020 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
TMEM40-203ENST00000428020 INE1O15225 51 aa2.45□□□□□ -2.02
TMEM40-203ENST00000428020 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
TMEM40-203ENST00000428020 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
TMEM40-203ENST00000428020 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
TMEM40-203ENST00000428020 H3BS24 57 aa2.26□□□□□ -2.05
TMEM40-203ENST00000428020 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
TMEM40-203ENST00000428020 PRM1P04553 51 aa2.12□□□□□ -2.07
TMEM40-203ENST00000428020 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
TMEM40-203ENST00000428020 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
TMEM40-203ENST00000428020 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
TMEM40-203ENST00000428020 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
TMEM40-203ENST00000428020 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
TMEM40-203ENST00000428020 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
TMEM40-203ENST00000428020 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
TMEM40-203ENST00000428020 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 149.1 ms