RNA–Protein interactions for RNA: ENST00000427217.5

ARPC1B-205, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-205ENST00000427217 CDC42SE1Q9NRR8 79 aa7.35□□□□□ -1.23
ARPC1B-205ENST00000427217 KRTAP19-3Q7Z4W3 81 aa7.32□□□□□ -1.24
ARPC1B-205ENST00000427217 LCE5AQ5TCM9 118 aa7.3□□□□□ -1.24
ARPC1B-205ENST00000427217 GPR98Q8WXG9 6306 aa7.24□□□□□ -1.25
ARPC1B-205ENST00000427217 LCE3BQ5TA77 95 aa7.22□□□□□ -1.25
ARPC1B-205ENST00000427217 MT1GP13640 62 aa7.2□□□□□ -1.26
ARPC1B-205ENST00000427217 MT1LQ93083 61 aa7.17□□□□□ -1.26
ARPC1B-205ENST00000427217 KRTAP23-1A1A580 65 aa7.15□□□□□ -1.26
ARPC1B-205ENST00000427217 KRTAP12-3P60328 96 aa7.15□□□□□ -1.26
ARPC1B-205ENST00000427217 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
ARPC1B-205ENST00000427217 ROMO1P60602 79 aa7.12□□□□□ -1.27
ARPC1B-205ENST00000427217 MT1MQ8N339 61 aa7.06□□□□□ -1.28
ARPC1B-205ENST00000427217 DSTQ03001 7570 aaKnown RBP7.01□□□□□ -1.29
ARPC1B-205ENST00000427217 BRK1Q8WUW1 75 aa6.88□□□□□ -1.31
ARPC1B-205ENST00000427217 KRTAP19-4Q3LI73 84 aa6.86□□□□□ -1.31
ARPC1B-205ENST00000427217 KRTAP4-3Q9BYR4 195 aa6.83□□□□□ -1.32
ARPC1B-205ENST00000427217 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
ARPC1B-205ENST00000427217 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
ARPC1B-205ENST00000427217 KRTAP4-9Q9BYQ8 210 aa6.73□□□□□ -1.33
ARPC1B-205ENST00000427217 LCE3CQ5T5A8 94 aa6.63□□□□□ -1.35
ARPC1B-205ENST00000427217 LCE4AQ5TA78 99 aa6.6□□□□□ -1.35
ARPC1B-205ENST00000427217 LCE1DQ5T752 114 aa6.57□□□□□ -1.36
ARPC1B-205ENST00000427217 KRTAP5-4Q6L8H1 288 aa6.56□□□□□ -1.36
ARPC1B-205ENST00000427217 HMCN1Q96RW7 5635 aa6.55□□□□□ -1.36
ARPC1B-205ENST00000427217 AHNAK2Q8IVF2 5795 aa6.5□□□□□ -1.37
ARPC1B-205ENST00000427217 MT4P47944 62 aa6.48□□□□□ -1.37
ARPC1B-205ENST00000427217 PMAIP1Q13794 54 aa6.48□□□□□ -1.37
ARPC1B-205ENST00000427217 KRTAP5-5Q701N2 237 aaPredicted RBP6.47□□□□□ -1.37
ARPC1B-205ENST00000427217 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
ARPC1B-205ENST00000427217 PRO0628Q9UI54 55 aa6.33□□□□□ -1.4
ARPC1B-205ENST00000427217 KRTAP5-10Q6L8G5 202 aa6.32□□□□□ -1.4
ARPC1B-205ENST00000427217 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
ARPC1B-205ENST00000427217 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
ARPC1B-205ENST00000427217 KRTAP12-4P60329 112 aa6.19□□□□□ -1.42
ARPC1B-205ENST00000427217 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
ARPC1B-205ENST00000427217 KRTAP5-7Q6L8G8 165 aa6.15□□□□□ -1.42
ARPC1B-205ENST00000427217 KRTAP20-2Q3LI61 65 aa6.14□□□□□ -1.43
ARPC1B-205ENST00000427217 PRAC1Q96KF2 57 aa6.13□□□□□ -1.43
ARPC1B-205ENST00000427217 MT1AP04731 61 aa6.12□□□□□ -1.43
ARPC1B-205ENST00000427217 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
ARPC1B-205ENST00000427217 KRTAP6-1Q3LI64 71 aa6.04□□□□□ -1.44
ARPC1B-205ENST00000427217 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
ARPC1B-205ENST00000427217 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
ARPC1B-205ENST00000427217 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
ARPC1B-205ENST00000427217 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
ARPC1B-205ENST00000427217 KRTAP6-2Q3LI66 62 aa5.69□□□□□ -1.5
ARPC1B-205ENST00000427217 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
ARPC1B-205ENST00000427217 MT3P25713 68 aa5.58□□□□□ -1.52
ARPC1B-205ENST00000427217 AHNAKQ09666 5890 aaKnown RBP5.57□□□□□ -1.52
ARPC1B-205ENST00000427217 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
ARPC1B-205ENST00000427217 MUC5ACP98088 5654 aa5.46□□□□□ -1.54
ARPC1B-205ENST00000427217 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
ARPC1B-205ENST00000427217 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
ARPC1B-205ENST00000427217 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
ARPC1B-205ENST00000427217 LUZP6Q538Z0 58 aa5.18□□□□□ -1.58
ARPC1B-205ENST00000427217 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
ARPC1B-205ENST00000427217 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
ARPC1B-205ENST00000427217 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
ARPC1B-205ENST00000427217 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
ARPC1B-205ENST00000427217 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
ARPC1B-205ENST00000427217 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
ARPC1B-205ENST00000427217 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
ARPC1B-205ENST00000427217 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
ARPC1B-205ENST00000427217 H3BS24 57 aa4.48□□□□□ -1.69
ARPC1B-205ENST00000427217 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
ARPC1B-205ENST00000427217 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
ARPC1B-205ENST00000427217 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
ARPC1B-205ENST00000427217 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
ARPC1B-205ENST00000427217 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
ARPC1B-205ENST00000427217 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
ARPC1B-205ENST00000427217 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
ARPC1B-205ENST00000427217 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
ARPC1B-205ENST00000427217 INE1O15225 51 aa3.68□□□□□ -1.82
ARPC1B-205ENST00000427217 PRM1P04553 51 aa3.65□□□□□ -1.83
ARPC1B-205ENST00000427217 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
ARPC1B-205ENST00000427217 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
ARPC1B-205ENST00000427217 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
ARPC1B-205ENST00000427217 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 92.8 ms