RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 KRTAP12-2P59991 146 aa5.53□□□□□ -1.52
SNX3-204ENST00000426155 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
SNX3-204ENST00000426155 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
SNX3-204ENST00000426155 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
SNX3-204ENST00000426155 A0A0D9SG42 100 aa5.46□□□□□ -1.54
SNX3-204ENST00000426155 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
SNX3-204ENST00000426155 KRTAP10-12P60413 245 aa5.42□□□□□ -1.54
SNX3-204ENST00000426155 SPRR2EP22531 72 aa5.4□□□□□ -1.54
SNX3-204ENST00000426155 SPRR2BP35325 72 aa5.4□□□□□ -1.54
SNX3-204ENST00000426155 SPRR2AP35326 72 aa5.4□□□□□ -1.54
SNX3-204ENST00000426155 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.54
SNX3-204ENST00000426155 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
SNX3-204ENST00000426155 CAMK2N1Q7Z7J9 78 aa5.36□□□□□ -1.55
SNX3-204ENST00000426155 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
SNX3-204ENST00000426155 KRTAP2-3P0C7H8 128 aa5.25□□□□□ -1.57
SNX3-204ENST00000426155 KRTAP2-4Q9BYR9 128 aa5.25□□□□□ -1.57
SNX3-204ENST00000426155 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
SNX3-204ENST00000426155 SPRR2DP22532 72 aa5.22□□□□□ -1.57
SNX3-204ENST00000426155 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
SNX3-204ENST00000426155 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
SNX3-204ENST00000426155 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
SNX3-204ENST00000426155 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
SNX3-204ENST00000426155 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
SNX3-204ENST00000426155 MT1EP04732 61 aa5.08□□□□□ -1.6
SNX3-204ENST00000426155 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
SNX3-204ENST00000426155 KRTAP5-11Q6L8G4 156 aa5.01□□□□□ -1.61
SNX3-204ENST00000426155 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
SNX3-204ENST00000426155 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
SNX3-204ENST00000426155 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
SNX3-204ENST00000426155 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.96□□□□□ -1.62
SNX3-204ENST00000426155 LUZP6Q538Z0 58 aa4.94□□□□□ -1.62
SNX3-204ENST00000426155 TNP1P09430 55 aa4.93□□□□□ -1.62
SNX3-204ENST00000426155 MT1LQ93083 61 aa4.87□□□□□ -1.63
SNX3-204ENST00000426155 MT1GP13640 62 aa4.86□□□□□ -1.63
SNX3-204ENST00000426155 MT1MQ8N339 61 aa4.83□□□□□ -1.64
SNX3-204ENST00000426155 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
SNX3-204ENST00000426155 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
SNX3-204ENST00000426155 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
SNX3-204ENST00000426155 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
SNX3-204ENST00000426155 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
SNX3-204ENST00000426155 MT4P47944 62 aa4.58□□□□□ -1.68
SNX3-204ENST00000426155 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
SNX3-204ENST00000426155 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
SNX3-204ENST00000426155 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
SNX3-204ENST00000426155 MT3P25713 68 aa4.43□□□□□ -1.7
SNX3-204ENST00000426155 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
SNX3-204ENST00000426155 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
SNX3-204ENST00000426155 INE1O15225 51 aa4.36□□□□□ -1.71
SNX3-204ENST00000426155 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
SNX3-204ENST00000426155 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
SNX3-204ENST00000426155 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
SNX3-204ENST00000426155 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
SNX3-204ENST00000426155 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
SNX3-204ENST00000426155 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
SNX3-204ENST00000426155 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
SNX3-204ENST00000426155 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
SNX3-204ENST00000426155 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
SNX3-204ENST00000426155 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
SNX3-204ENST00000426155 MT1AP04731 61 aa4.12□□□□□ -1.75
SNX3-204ENST00000426155 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
SNX3-204ENST00000426155 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
SNX3-204ENST00000426155 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
SNX3-204ENST00000426155 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
SNX3-204ENST00000426155 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
SNX3-204ENST00000426155 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
SNX3-204ENST00000426155 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
SNX3-204ENST00000426155 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.83
SNX3-204ENST00000426155 MUC5ACP98088 5654 aa3.59□□□□□ -1.84
SNX3-204ENST00000426155 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
SNX3-204ENST00000426155 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
SNX3-204ENST00000426155 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
SNX3-204ENST00000426155 PRM1P04553 51 aa2.95□□□□□ -1.94
SNX3-204ENST00000426155 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
SNX3-204ENST00000426155 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
SNX3-204ENST00000426155 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
SNX3-204ENST00000426155 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SNX3-204ENST00000426155 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms