RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 MT1XP80297 61 aa4.27□□□□□ -1.73
MDC1-205ENST00000425072 ROMO1P60602 79 aa4.25□□□□□ -1.73
MDC1-205ENST00000425072 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
MDC1-205ENST00000425072 TNP1P09430 55 aa4.21□□□□□ -1.74
MDC1-205ENST00000425072 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
MDC1-205ENST00000425072 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
MDC1-205ENST00000425072 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
MDC1-205ENST00000425072 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
MDC1-205ENST00000425072 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
MDC1-205ENST00000425072 KRTAP10-12P60413 245 aa4.09□□□□□ -1.75
MDC1-205ENST00000425072 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
MDC1-205ENST00000425072 PP632Q6XCG6 107 aa4.05□□□□□ -1.76
MDC1-205ENST00000425072 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
MDC1-205ENST00000425072 KRTAP2-2Q9BYT5 123 aa4.02□□□□□ -1.77
MDC1-205ENST00000425072 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
MDC1-205ENST00000425072 KRTAP5-9P26371 169 aa4□□□□□ -1.77
MDC1-205ENST00000425072 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
MDC1-205ENST00000425072 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
MDC1-205ENST00000425072 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
MDC1-205ENST00000425072 KRTAP8-1Q8IUC2 63 aa3.94□□□□□ -1.78
MDC1-205ENST00000425072 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
MDC1-205ENST00000425072 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
MDC1-205ENST00000425072 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
MDC1-205ENST00000425072 SPRR2EP22531 72 aa3.8□□□□□ -1.8
MDC1-205ENST00000425072 SPRR2BP35325 72 aa3.8□□□□□ -1.8
MDC1-205ENST00000425072 SPRR2AP35326 72 aa3.8□□□□□ -1.8
MDC1-205ENST00000425072 SPRR2FQ96RM1 72 aa3.8□□□□□ -1.8
MDC1-205ENST00000425072 MT3P25713 68 aa3.79□□□□□ -1.8
MDC1-205ENST00000425072 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
MDC1-205ENST00000425072 MT1EP04732 61 aa3.76□□□□□ -1.81
MDC1-205ENST00000425072 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
MDC1-205ENST00000425072 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
MDC1-205ENST00000425072 MT1GP13640 62 aa3.68□□□□□ -1.82
MDC1-205ENST00000425072 SPRR2DP22532 72 aa3.68□□□□□ -1.82
MDC1-205ENST00000425072 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
MDC1-205ENST00000425072 MT1LQ93083 61 aa3.67□□□□□ -1.82
MDC1-205ENST00000425072 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
MDC1-205ENST00000425072 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
MDC1-205ENST00000425072 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
MDC1-205ENST00000425072 MT1MQ8N339 61 aa3.55□□□□□ -1.84
MDC1-205ENST00000425072 KRTAP5-7Q6L8G8 165 aa3.54□□□□□ -1.84
MDC1-205ENST00000425072 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
MDC1-205ENST00000425072 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
MDC1-205ENST00000425072 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
MDC1-205ENST00000425072 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
MDC1-205ENST00000425072 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
MDC1-205ENST00000425072 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
MDC1-205ENST00000425072 MT4P47944 62 aa3.29□□□□□ -1.88
MDC1-205ENST00000425072 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
MDC1-205ENST00000425072 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
MDC1-205ENST00000425072 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
MDC1-205ENST00000425072 MT1AP04731 61 aa3.15□□□□□ -1.91
MDC1-205ENST00000425072 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
MDC1-205ENST00000425072 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
MDC1-205ENST00000425072 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
MDC1-205ENST00000425072 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
MDC1-205ENST00000425072 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
MDC1-205ENST00000425072 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
MDC1-205ENST00000425072 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
MDC1-205ENST00000425072 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
MDC1-205ENST00000425072 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
MDC1-205ENST00000425072 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
MDC1-205ENST00000425072 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
MDC1-205ENST00000425072 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
MDC1-205ENST00000425072 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
MDC1-205ENST00000425072 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
MDC1-205ENST00000425072 INE1O15225 51 aa2.64□□□□□ -1.99
MDC1-205ENST00000425072 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
MDC1-205ENST00000425072 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
MDC1-205ENST00000425072 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
MDC1-205ENST00000425072 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
MDC1-205ENST00000425072 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
MDC1-205ENST00000425072 PRM1P04553 51 aa2.17□□□□□ -2.06
MDC1-205ENST00000425072 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
MDC1-205ENST00000425072 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
MDC1-205ENST00000425072 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
MDC1-205ENST00000425072 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
MDC1-205ENST00000425072 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 17 ms