RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 MT1EP04732 61 aa5.99□□□□□ -1.45
SNHG17-205ENST00000424235 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
SNHG17-205ENST00000424235 C10orf95Q9H7T3 257 aa5.97□□□□□ -1.45
SNHG17-205ENST00000424235 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.46
SNHG17-205ENST00000424235 ROMO1P60602 79 aa5.93□□□□□ -1.46
SNHG17-205ENST00000424235 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
SNHG17-205ENST00000424235 PMAIP1Q13794 54 aa5.92□□□□□ -1.46
SNHG17-205ENST00000424235 LCE5AQ5TCM9 118 aa5.92□□□□□ -1.46
SNHG17-205ENST00000424235 TNP1P09430 55 aa5.88□□□□□ -1.47
SNHG17-205ENST00000424235 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
SNHG17-205ENST00000424235 KRTAP25-1Q3LHN0 102 aa5.83□□□□□ -1.48
SNHG17-205ENST00000424235 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
SNHG17-205ENST00000424235 MT1GP13640 62 aa5.8□□□□□ -1.48
SNHG17-205ENST00000424235 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
SNHG17-205ENST00000424235 HMCN1Q96RW7 5635 aa5.78□□□□□ -1.48
SNHG17-205ENST00000424235 AHNAK2Q8IVF2 5795 aa5.75□□□□□ -1.49
SNHG17-205ENST00000424235 MT1LQ93083 61 aa5.72□□□□□ -1.49
SNHG17-205ENST00000424235 MT1MQ8N339 61 aa5.71□□□□□ -1.5
SNHG17-205ENST00000424235 MT4P47944 62 aa5.69□□□□□ -1.5
SNHG17-205ENST00000424235 KRTAP5-10Q6L8G5 202 aa5.65□□□□□ -1.5
SNHG17-205ENST00000424235 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
SNHG17-205ENST00000424235 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
SNHG17-205ENST00000424235 KTN1-AS1Q86SY8 53 aa5.6□□□□□ -1.51
SNHG17-205ENST00000424235 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
SNHG17-205ENST00000424235 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
SNHG17-205ENST00000424235 PRAC1Q96KF2 57 aa5.54□□□□□ -1.52
SNHG17-205ENST00000424235 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
SNHG17-205ENST00000424235 KRTAP5-7Q6L8G8 165 aa5.47□□□□□ -1.53
SNHG17-205ENST00000424235 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
SNHG17-205ENST00000424235 KRTAP5-4Q6L8H1 288 aa5.45□□□□□ -1.54
SNHG17-205ENST00000424235 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
SNHG17-205ENST00000424235 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
SNHG17-205ENST00000424235 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
SNHG17-205ENST00000424235 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
SNHG17-205ENST00000424235 KRTAP20-2Q3LI61 65 aa5.2□□□□□ -1.58
SNHG17-205ENST00000424235 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
SNHG17-205ENST00000424235 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
SNHG17-205ENST00000424235 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
SNHG17-205ENST00000424235 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
SNHG17-205ENST00000424235 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
SNHG17-205ENST00000424235 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
SNHG17-205ENST00000424235 MT1AP04731 61 aa4.87□□□□□ -1.63
SNHG17-205ENST00000424235 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
SNHG17-205ENST00000424235 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
SNHG17-205ENST00000424235 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
SNHG17-205ENST00000424235 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
SNHG17-205ENST00000424235 MUC5BQ9HC84 5762 aaPredicted RBP4.79□□□□□ -1.64
SNHG17-205ENST00000424235 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
SNHG17-205ENST00000424235 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
SNHG17-205ENST00000424235 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
SNHG17-205ENST00000424235 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
SNHG17-205ENST00000424235 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
SNHG17-205ENST00000424235 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
SNHG17-205ENST00000424235 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
SNHG17-205ENST00000424235 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
SNHG17-205ENST00000424235 MT3P25713 68 aa4.49□□□□□ -1.69
SNHG17-205ENST00000424235 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
SNHG17-205ENST00000424235 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
SNHG17-205ENST00000424235 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
SNHG17-205ENST00000424235 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
SNHG17-205ENST00000424235 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
SNHG17-205ENST00000424235 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
SNHG17-205ENST00000424235 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
SNHG17-205ENST00000424235 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
SNHG17-205ENST00000424235 H3BS24 57 aa3.65□□□□□ -1.83
SNHG17-205ENST00000424235 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
SNHG17-205ENST00000424235 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
SNHG17-205ENST00000424235 INE1O15225 51 aa3.57□□□□□ -1.84
SNHG17-205ENST00000424235 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
SNHG17-205ENST00000424235 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
SNHG17-205ENST00000424235 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
SNHG17-205ENST00000424235 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
SNHG17-205ENST00000424235 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
SNHG17-205ENST00000424235 PRM1P04553 51 aa3.07□□□□□ -1.92
SNHG17-205ENST00000424235 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
SNHG17-205ENST00000424235 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
SNHG17-205ENST00000424235 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
SNHG17-205ENST00000424235 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 85.8 ms