RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
GTF3C2-204ENST00000423998 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
GTF3C2-204ENST00000423998 ROMO1P60602 79 aa5.05□□□□□ -1.6
GTF3C2-204ENST00000423998 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
GTF3C2-204ENST00000423998 MT1GP13640 62 aa5.01□□□□□ -1.61
GTF3C2-204ENST00000423998 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
GTF3C2-204ENST00000423998 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
GTF3C2-204ENST00000423998 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
GTF3C2-204ENST00000423998 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
GTF3C2-204ENST00000423998 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
GTF3C2-204ENST00000423998 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
GTF3C2-204ENST00000423998 BRK1Q8WUW1 75 aa4.9□□□□□ -1.63
GTF3C2-204ENST00000423998 MT1LQ93083 61 aa4.9□□□□□ -1.63
GTF3C2-204ENST00000423998 H3BS24 57 aa4.89□□□□□ -1.63
GTF3C2-204ENST00000423998 MT1MQ8N339 61 aa4.82□□□□□ -1.64
GTF3C2-204ENST00000423998 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
GTF3C2-204ENST00000423998 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
GTF3C2-204ENST00000423998 PMAIP1Q13794 54 aa4.67□□□□□ -1.66
GTF3C2-204ENST00000423998 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
GTF3C2-204ENST00000423998 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
GTF3C2-204ENST00000423998 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
GTF3C2-204ENST00000423998 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
GTF3C2-204ENST00000423998 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
GTF3C2-204ENST00000423998 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
GTF3C2-204ENST00000423998 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
GTF3C2-204ENST00000423998 MT4P47944 62 aa4.4□□□□□ -1.71
GTF3C2-204ENST00000423998 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
GTF3C2-204ENST00000423998 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
GTF3C2-204ENST00000423998 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
GTF3C2-204ENST00000423998 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
GTF3C2-204ENST00000423998 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
GTF3C2-204ENST00000423998 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
GTF3C2-204ENST00000423998 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
GTF3C2-204ENST00000423998 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
GTF3C2-204ENST00000423998 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
GTF3C2-204ENST00000423998 MT1AP04731 61 aa4.21□□□□□ -1.74
GTF3C2-204ENST00000423998 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
GTF3C2-204ENST00000423998 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
GTF3C2-204ENST00000423998 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
GTF3C2-204ENST00000423998 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
GTF3C2-204ENST00000423998 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
GTF3C2-204ENST00000423998 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
GTF3C2-204ENST00000423998 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
GTF3C2-204ENST00000423998 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
GTF3C2-204ENST00000423998 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
GTF3C2-204ENST00000423998 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
GTF3C2-204ENST00000423998 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
GTF3C2-204ENST00000423998 MT3P25713 68 aa3.92□□□□□ -1.78
GTF3C2-204ENST00000423998 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
GTF3C2-204ENST00000423998 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
GTF3C2-204ENST00000423998 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
GTF3C2-204ENST00000423998 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
GTF3C2-204ENST00000423998 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
GTF3C2-204ENST00000423998 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
GTF3C2-204ENST00000423998 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
GTF3C2-204ENST00000423998 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
GTF3C2-204ENST00000423998 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
GTF3C2-204ENST00000423998 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
GTF3C2-204ENST00000423998 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
GTF3C2-204ENST00000423998 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
GTF3C2-204ENST00000423998 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
GTF3C2-204ENST00000423998 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
GTF3C2-204ENST00000423998 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
GTF3C2-204ENST00000423998 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
GTF3C2-204ENST00000423998 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
GTF3C2-204ENST00000423998 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
GTF3C2-204ENST00000423998 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
GTF3C2-204ENST00000423998 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
GTF3C2-204ENST00000423998 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
GTF3C2-204ENST00000423998 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
GTF3C2-204ENST00000423998 INE1O15225 51 aa2.74□□□□□ -1.97
GTF3C2-204ENST00000423998 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
GTF3C2-204ENST00000423998 PRM1P04553 51 aa2.53□□□□□ -2
GTF3C2-204ENST00000423998 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
GTF3C2-204ENST00000423998 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
GTF3C2-204ENST00000423998 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
GTF3C2-204ENST00000423998 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
GTF3C2-204ENST00000423998 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms