RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 CDC42SE1Q9NRR8 79 aa7.01□□□□□ -1.29
GCDH-202ENST00000421816 LCE3BQ5TA77 95 aa6.93□□□□□ -1.3
GCDH-202ENST00000421816 KRTAP2-2Q9BYT5 123 aa6.93□□□□□ -1.3
GCDH-202ENST00000421816 KRTAP2-1Q9BYU5 128 aa6.93□□□□□ -1.3
GCDH-202ENST00000421816 MT1GP13640 62 aa6.92□□□□□ -1.3
GCDH-202ENST00000421816 MT1LQ93083 61 aa6.92□□□□□ -1.3
GCDH-202ENST00000421816 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
GCDH-202ENST00000421816 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
GCDH-202ENST00000421816 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
GCDH-202ENST00000421816 ROMO1P60602 79 aa6.82□□□□□ -1.32
GCDH-202ENST00000421816 MT1MQ8N339 61 aa6.81□□□□□ -1.32
GCDH-202ENST00000421816 DSTQ03001 7570 aaKnown RBP6.71□□□□□ -1.34
GCDH-202ENST00000421816 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
GCDH-202ENST00000421816 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
GCDH-202ENST00000421816 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
GCDH-202ENST00000421816 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
GCDH-202ENST00000421816 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
GCDH-202ENST00000421816 LCE3CQ5T5A8 94 aa6.37□□□□□ -1.39
GCDH-202ENST00000421816 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
GCDH-202ENST00000421816 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
GCDH-202ENST00000421816 KRTAP5-4Q6L8H1 288 aa6.32□□□□□ -1.4
GCDH-202ENST00000421816 LCE1DQ5T752 114 aa6.26□□□□□ -1.41
GCDH-202ENST00000421816 KRTAP5-5Q701N2 237 aaPredicted RBP6.23□□□□□ -1.41
GCDH-202ENST00000421816 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
GCDH-202ENST00000421816 MT4P47944 62 aa6.2□□□□□ -1.42
GCDH-202ENST00000421816 PMAIP1Q13794 54 aa6.19□□□□□ -1.42
GCDH-202ENST00000421816 HMCN1Q96RW7 5635 aa6.13□□□□□ -1.43
GCDH-202ENST00000421816 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
GCDH-202ENST00000421816 KRTAP9-6A8MVA2 160 aa6.02□□□□□ -1.45
GCDH-202ENST00000421816 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
GCDH-202ENST00000421816 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
GCDH-202ENST00000421816 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
GCDH-202ENST00000421816 KRTAP20-2Q3LI61 65 aa5.93□□□□□ -1.46
GCDH-202ENST00000421816 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.46
GCDH-202ENST00000421816 MT1AP04731 61 aa5.89□□□□□ -1.47
GCDH-202ENST00000421816 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
GCDH-202ENST00000421816 KRTAP6-1Q3LI64 71 aa5.83□□□□□ -1.48
GCDH-202ENST00000421816 GPR98Q8WXG9 6306 aa5.83□□□□□ -1.48
GCDH-202ENST00000421816 AHNAK2Q8IVF2 5795 aa5.79□□□□□ -1.48
GCDH-202ENST00000421816 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
GCDH-202ENST00000421816 KTN1-AS1Q86SY8 53 aa5.68□□□□□ -1.5
GCDH-202ENST00000421816 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
GCDH-202ENST00000421816 KRTAP5-10Q6L8G5 202 aa5.65□□□□□ -1.5
GCDH-202ENST00000421816 KRTAP5-2Q701N4 177 aa5.6□□□□□ -1.51
GCDH-202ENST00000421816 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
GCDH-202ENST00000421816 KRTAP5-7Q6L8G8 165 aa5.39□□□□□ -1.55
GCDH-202ENST00000421816 MT3P25713 68 aa5.36□□□□□ -1.55
GCDH-202ENST00000421816 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
GCDH-202ENST00000421816 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
GCDH-202ENST00000421816 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
GCDH-202ENST00000421816 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
GCDH-202ENST00000421816 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
GCDH-202ENST00000421816 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
GCDH-202ENST00000421816 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
GCDH-202ENST00000421816 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
GCDH-202ENST00000421816 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
GCDH-202ENST00000421816 MUC5BQ9HC84 5762 aaPredicted RBP4.71□□□□□ -1.66
GCDH-202ENST00000421816 AHNAKQ09666 5890 aaKnown RBP4.67□□□□□ -1.66
GCDH-202ENST00000421816 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.67
GCDH-202ENST00000421816 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
GCDH-202ENST00000421816 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
GCDH-202ENST00000421816 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
GCDH-202ENST00000421816 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
GCDH-202ENST00000421816 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
GCDH-202ENST00000421816 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
GCDH-202ENST00000421816 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
GCDH-202ENST00000421816 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
GCDH-202ENST00000421816 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
GCDH-202ENST00000421816 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
GCDH-202ENST00000421816 PRM1P04553 51 aa3.5□□□□□ -1.85
GCDH-202ENST00000421816 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
GCDH-202ENST00000421816 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
GCDH-202ENST00000421816 INE1O15225 51 aa3.47□□□□□ -1.85
GCDH-202ENST00000421816 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
GCDH-202ENST00000421816 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
GCDH-202ENST00000421816 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
GCDH-202ENST00000421816 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.05
GCDH-202ENST00000421816 H3BS24 57 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 117 ms